RNA–Protein interactions for RNA: ENST00000257632.9

UPK3B-201, Transcript of uroplakin 3B, humanhuman

APPRIS P5 TSL 2 BASIC

Gene UPK3B, Length 1,296 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-201ENST00000257632 LRRC58Q96CX6 371 aa16.78■□□□□ 0.28
UPK3B-201ENST00000257632 ADGRG7Q96K78 797 aa16.78■□□□□ 0.28
UPK3B-201ENST00000257632 ZNF607Q96SK3 696 aa16.78■□□□□ 0.28
UPK3B-201ENST00000257632 SLC39A3Q9BRY0 314 aa16.78■□□□□ 0.28
UPK3B-201ENST00000257632 SFXN3Q9BWM7 321 aa16.78■□□□□ 0.28
UPK3B-201ENST00000257632 TIGARQ9NQ88 270 aa16.78■□□□□ 0.28
UPK3B-201ENST00000257632 HCFC1P51610 2035 aa16.77■□□□□ 0.28
UPK3B-201ENST00000257632 EEF1E1-BLOC1S5C9J1V9 151 aa16.77■□□□□ 0.28
UPK3B-201ENST00000257632 EEF1E1O43324 174 aaKnown RBP16.77■□□□□ 0.28
UPK3B-201ENST00000257632 SNX3O60493 162 aa16.77■□□□□ 0.28
UPK3B-201ENST00000257632 NPPAP01160 153 aa16.77■□□□□ 0.28
UPK3B-201ENST00000257632 GKN3PP0CG01 181 aa16.77■□□□□ 0.28
UPK3B-201ENST00000257632 AQP1P29972 269 aa16.77■□□□□ 0.28
UPK3B-201ENST00000257632 APOBEC1P41238 236 aaKnown RBP16.77■□□□□ 0.28
UPK3B-201ENST00000257632 ASCL1P50553 236 aa16.77■□□□□ 0.28
UPK3B-201ENST00000257632 CARD18P57730 90 aa16.77■□□□□ 0.28
UPK3B-201ENST00000257632 COPZ1P61923 177 aa16.77■□□□□ 0.28
UPK3B-201ENST00000257632 RBBP4Q09028 425 aa16.77■□□□□ 0.28
UPK3B-201ENST00000257632 EPS8Q12929 822 aa16.77■□□□□ 0.28
UPK3B-201ENST00000257632 EEF1A1P5Q5VTE0 462 aa16.77■□□□□ 0.28
UPK3B-201ENST00000257632 NANOGP8Q6NSW7 305 aa16.77■□□□□ 0.28
UPK3B-201ENST00000257632 CLIP4Q8N3C7 705 aa16.77■□□□□ 0.28
UPK3B-201ENST00000257632 OR10A6Q8NH74 314 aa16.77■□□□□ 0.28
UPK3B-201ENST00000257632 SLC25A43Q8WUT9 341 aaPredicted RBP16.77■□□□□ 0.28
UPK3B-201ENST00000257632 REXO5Q96IC2 774 aaKnown RBP16.77■□□□□ 0.28
UPK3B-201ENST00000257632 KAT8Q9H7Z6 458 aaKnown RBP16.77■□□□□ 0.28
UPK3B-201ENST00000257632 NANOGQ9H9S0 305 aa16.77■□□□□ 0.28
UPK3B-201ENST00000257632 CTPS2Q9NRF8 586 aa16.77■□□□□ 0.28
UPK3B-201ENST00000257632 CENPEQ02224 2701 aa16.76■□□□□ 0.27
UPK3B-201ENST00000257632 HNRNPRO43390 633 aaKnown RBP16.76■□□□□ 0.27
UPK3B-201ENST00000257632 ADAM11O75078 769 aa16.76■□□□□ 0.27
UPK3B-201ENST00000257632 SERPINB7O75635 380 aa16.76■□□□□ 0.27
UPK3B-201ENST00000257632 PLGP00747 810 aaPredicted RBP16.76■□□□□ 0.27
UPK3B-201ENST00000257632 CRHP06850 196 aa16.76■□□□□ 0.27
UPK3B-201ENST00000257632 TFPIP10646 304 aa16.76■□□□□ 0.27
UPK3B-201ENST00000257632 COX4I1P13073 169 aa16.76■□□□□ 0.27
UPK3B-201ENST00000257632 HTR3AP46098 478 aa16.76■□□□□ 0.27
UPK3B-201ENST00000257632 TFF3Q07654 80 aa16.76■□□□□ 0.27
UPK3B-201ENST00000257632 ADRM1Q16186 407 aa16.76■□□□□ 0.27
UPK3B-201ENST00000257632 SERPINA11Q86U17 422 aa16.76■□□□□ 0.27
UPK3B-201ENST00000257632 MCEMP1Q8IX19 187 aa16.76■□□□□ 0.27
UPK3B-201ENST00000257632 CADM2Q8N3J6 435 aa16.76■□□□□ 0.27
UPK3B-201ENST00000257632 CNEP1R1Q8N9A8 125 aa16.76■□□□□ 0.27
UPK3B-201ENST00000257632 OR8J3Q8NGG0 315 aa16.76■□□□□ 0.27
UPK3B-201ENST00000257632 CPNE4Q96A23 557 aaPredicted RBP16.76■□□□□ 0.27
UPK3B-201ENST00000257632 RCN3Q96D15 328 aa16.76■□□□□ 0.27
UPK3B-201ENST00000257632 OR5B2Q96R09 309 aa16.76■□□□□ 0.27
UPK3B-201ENST00000257632 ECSITQ9BQ95 431 aa16.76■□□□□ 0.27
UPK3B-201ENST00000257632 CCDC106Q9BWC9 280 aa16.76■□□□□ 0.27
UPK3B-201ENST00000257632 RNF122Q9H9V4 155 aa16.76■□□□□ 0.27
UPK3B-201ENST00000257632 CHRNA9Q9UGM1 479 aa16.76■□□□□ 0.27
UPK3B-201ENST00000257632 SLC13A4Q9UKG4 626 aa16.76■□□□□ 0.27
UPK3B-201ENST00000257632 A0A1W2PNR3 127 aa16.75■□□□□ 0.27
UPK3B-201ENST00000257632 A0A1W2PNV4 684 aa16.75■□□□□ 0.27
UPK3B-201ENST00000257632 PRORSD1PA6NEY8 169 aa16.75■□□□□ 0.27
UPK3B-201ENST00000257632 FAAHO00519 579 aa16.75■□□□□ 0.27
UPK3B-201ENST00000257632 AQP8O94778 261 aa16.75■□□□□ 0.27
UPK3B-201ENST00000257632 CCNA2P20248 432 aa16.75■□□□□ 0.27
UPK3B-201ENST00000257632 PRKAR1BP31321 381 aa16.75■□□□□ 0.27
UPK3B-201ENST00000257632 POLR2HP52434 150 aaKnown RBP16.75■□□□□ 0.27
UPK3B-201ENST00000257632 DLX5P56178 289 aa16.75■□□□□ 0.27
UPK3B-201ENST00000257632 SIRPAP78324 504 aa16.75■□□□□ 0.27
UPK3B-201ENST00000257632 SYT14P1Q58G82 188 aa16.75■□□□□ 0.27
UPK3B-201ENST00000257632 RABL3Q5HYI8 236 aa16.75■□□□□ 0.27
UPK3B-201ENST00000257632 MEX3BQ6ZN04 569 aaKnown RBP16.75■□□□□ 0.27
UPK3B-201ENST00000257632 PTOV1Q86YD1 416 aa16.75■□□□□ 0.27
UPK3B-201ENST00000257632 SLC30A8Q8IWU4 369 aa16.75■□□□□ 0.27
UPK3B-201ENST00000257632 MARVELD3Q96A59 401 aa16.75■□□□□ 0.27
UPK3B-201ENST00000257632 PIF1Q9H611 641 aa16.75■□□□□ 0.27
UPK3B-201ENST00000257632 NPDC1Q9NQX5 325 aaPredicted RBP16.75■□□□□ 0.27
UPK3B-201ENST00000257632 ITPR2Q14571 2701 aa16.75■□□□□ 0.27
UPK3B-201ENST00000257632 TMED7-TICAM2A0A0A6YYA0 188 aa16.74■□□□□ 0.27
UPK3B-201ENST00000257632 FXYD1O00168 92 aa16.74■□□□□ 0.27
UPK3B-201ENST00000257632 AIM2O14862 343 aa16.74■□□□□ 0.27
UPK3B-201ENST00000257632 TACR3P29371 465 aa16.74■□□□□ 0.27
UPK3B-201ENST00000257632 UQCRC1P31930 480 aa16.74■□□□□ 0.27
UPK3B-201ENST00000257632 SLC1A3P43003 542 aa16.74■□□□□ 0.27
UPK3B-201ENST00000257632 CPA2P48052 419 aa16.74■□□□□ 0.27
UPK3B-201ENST00000257632 ZNF239Q16600 458 aaKnown RBP16.74■□□□□ 0.27
UPK3B-201ENST00000257632 INTS11Q5TA45 600 aaKnown RBP16.74■□□□□ 0.27
UPK3B-201ENST00000257632 GTF2IRD2BQ6EKJ0 949 aa16.74■□□□□ 0.27
UPK3B-201ENST00000257632 DHRS4L2Q6PKH6 230 aa16.74■□□□□ 0.27
UPK3B-201ENST00000257632 NET1Q7Z628 596 aaPredicted RBP16.74■□□□□ 0.27
UPK3B-201ENST00000257632 GTF2IRD2Q86UP8 949 aa16.74■□□□□ 0.27
UPK3B-201ENST00000257632 ARMC8Q8IUR7 673 aa16.74■□□□□ 0.27
UPK3B-201ENST00000257632 ZZZ3Q8IYH5 903 aa16.74■□□□□ 0.27
UPK3B-201ENST00000257632 BHLHE22Q8NFJ8 381 aaPredicted RBP16.74■□□□□ 0.27
UPK3B-201ENST00000257632 ROBO4Q8WZ75 1007 aa16.74■□□□□ 0.27
UPK3B-201ENST00000257632 SRXN1Q9BYN0 137 aa16.74■□□□□ 0.27
UPK3B-201ENST00000257632 PIGMQ9H3S5 423 aa16.74■□□□□ 0.27
UPK3B-201ENST00000257632 COQ10BQ9H8M1 238 aa16.74■□□□□ 0.27
UPK3B-201ENST00000257632 KLHL28Q9NXS3 571 aa16.74■□□□□ 0.27
UPK3B-201ENST00000257632 PACSIN3Q9UKS6 424 aa16.74■□□□□ 0.27
UPK3B-201ENST00000257632 TMED7Q9Y3B3 224 aa16.74■□□□□ 0.27
UPK3B-201ENST00000257632 CHST2Q9Y4C5 530 aa16.74■□□□□ 0.27
UPK3B-201ENST00000257632 CREBBPQ92793 2442 aa16.74■□□□□ 0.27
UPK3B-201ENST00000257632 FRS3O43559 492 aa16.73■□□□□ 0.27
UPK3B-201ENST00000257632 SMNDC1O75940 238 aaKnown RBP eCLIP16.73■□□□□ 0.27
UPK3B-201ENST00000257632 PRG2P13727 222 aa16.73■□□□□ 0.27
UPK3B-201ENST00000257632 FKBP2P26885 142 aaKnown RBP16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms