RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 FuzQ3UYI6 415 aa13.67□□□□□ -0.22
Nup88-202ENSMUST00000108530 Spag8Q3V0Q6 470 aa13.67□□□□□ -0.22
Nup88-202ENSMUST00000108530 Slc39a12Q5FWH7 689 aa13.67□□□□□ -0.22
Nup88-202ENSMUST00000108530 Il12rb1Q60837 738 aa13.67□□□□□ -0.22
Nup88-202ENSMUST00000108530 Adam12Q61824 903 aa13.67□□□□□ -0.22
Nup88-202ENSMUST00000108530 BocQ6AZB0 1110 aa13.67□□□□□ -0.22
Nup88-202ENSMUST00000108530 Slc16a12Q8BGC3 486 aa13.67□□□□□ -0.22
Nup88-202ENSMUST00000108530 Q8BHG2 160 aa13.67□□□□□ -0.22
Nup88-202ENSMUST00000108530 Znf451Q8C0P7 1056 aa13.67□□□□□ -0.22
Nup88-202ENSMUST00000108530 BpifcQ8C186 509 aa13.67□□□□□ -0.22
Nup88-202ENSMUST00000108530 GatcQ8CBY0 155 aa13.67□□□□□ -0.22
Nup88-202ENSMUST00000108530 Eipr1Q8K0G5 386 aa13.67□□□□□ -0.22
Nup88-202ENSMUST00000108530 CthQ8VCN5 398 aa13.67□□□□□ -0.22
Nup88-202ENSMUST00000108530 Fam110cQ8VE94 421 aa13.67□□□□□ -0.22
Nup88-202ENSMUST00000108530 Olfr799Q8VGI7 311 aa13.67□□□□□ -0.22
Nup88-202ENSMUST00000108530 Egln2Q91YE2 419 aa13.67□□□□□ -0.22
Nup88-202ENSMUST00000108530 Defb5Q9EPV9 64 aa13.67□□□□□ -0.22
Nup88-202ENSMUST00000108530 Ighv16-1A0A0A6YW39 117 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Dmrta2A2A9A2 531 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Gm3149E9PW52 257 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Gm8237E9Q257 205 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Gm21103E9Q2Q1 267 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Gm3476K7N6V0 257 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Gm8362K7N6Y6 257 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Wisp1O54775 367 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Gmeb2P58929 530 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Sgpp2Q810K3 354 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Zfp418Q8BFS8 652 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Galnt12Q8BGT9 576 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Tmem163Q8C996 288 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Lurap1lQ8K2P1 221 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 RfesdQ8K2P6 157 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Vmn1r201Q8R262 300 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 NpntQ91V88 561 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Ferd3lQ923Z4 168 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Adam25Q9R159 760 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Ptdss2Q9Z1X2 473 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Kcnk7Q9Z2T1 307 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 MyofQ69ZN7 2048 aaKnown RBP13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Myo15bI7HPW8 3033 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Lrrc72A0A1Y7VMI0 288 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Rpl3lE9PWZ3 407 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Olfr592E9PYB3 312 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Gm21820J3KMU2 361 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Arg2O08691 354 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 TesP47226 423 aaKnown RBP13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Ccr4P51680 360 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Gm10644Q3TZG3 87 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Gtpbp2Q3UJK4 602 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Slc44a5Q5RJI2 710 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Tas2r135Q7TQA9 312 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Phf21bQ8C966 487 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Spcs2Q9CYN2 226 aaKnown RBP13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Ramp2Q9WUP0 189 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 Wdfy4E9Q2M9 3149 aa13.66□□□□□ -0.22
Nup88-202ENSMUST00000108530 RttnQ8R4Y8 2226 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Slc25a43A2A3V2 341 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Cx3cl1O35188 395 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Matn3O35701 481 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Tgfbr3O88393 850 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 P06336 421 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Adamts15P59384 950 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Ankrd28Q505D1 1053 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Dcdc2Q5DU00 475 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Snta1Q61234 503 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 E2f1Q61501 430 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Efcab3Q80X60 432 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Slc35d3Q8BGF8 422 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Flrt3Q8BGT1 649 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Slc35c1Q8BLX4 363 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Olfr510Q8VEW6 314 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Olfr622Q8VGY7 317 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Rnf167Q91XF4 347 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 NtmQ99PJ0 344 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Gnpda2Q9CRC9 276 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Clec3aQ9EPW4 196 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Olfr1089A0A1L1SRK6 311 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Olfr730E9Q8M3 318 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Nme6O88425 189 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Tuba3aP05214 450 aaKnown RBP13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 CtskP55097 329 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Nfatc3P97305 1075 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Cmklr1P97468 371 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Mtmr11Q3V1L6 700 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Fbxo34Q80XI1 695 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Cadm2Q8BLQ9 435 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Ckap4Q8BMK4 575 aaKnown RBP13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Fbxw14Q8C2Y5 466 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Irf2bplQ8K3X4 775 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Zdhhc6Q9CPV7 413 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Gm17190V9GX38 357 aa13.65□□□□□ -0.22
Nup88-202ENSMUST00000108530 Kif26bQ7TNC6 2112 aa13.64□□□□□ -0.23
Nup88-202ENSMUST00000108530 Smok4aA0JLX3 433 aa13.64□□□□□ -0.23
Nup88-202ENSMUST00000108530 Zfp981A2A8V7 445 aa13.64□□□□□ -0.23
Nup88-202ENSMUST00000108530 BC035947B2RQY6 695 aa13.64□□□□□ -0.23
Nup88-202ENSMUST00000108530 Spata6lB2RV46 347 aa13.64□□□□□ -0.23
Nup88-202ENSMUST00000108530 ClppO88696 272 aa13.64□□□□□ -0.23
Nup88-202ENSMUST00000108530 Nfkbil1O88995 381 aa13.64□□□□□ -0.23
Nup88-202ENSMUST00000108530 Adh1P00329 375 aa13.64□□□□□ -0.23
Nup88-202ENSMUST00000108530 Cbx3P23198 183 aaKnown RBP13.64□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 47.5 ms