RNA–Protein interactions for RNA: ENST00000637927.1

CACNA1A-253, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 6,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-253ENST00000637927 C14orf28Q4W4Y0 310 aa15.96■□□□□ 0.15
CACNA1A-253ENST00000637927 ATG9BQ674R7 924 aa15.96■□□□□ 0.15
CACNA1A-253ENST00000637927 C20orf24Q9BUV8 137 aa15.96■□□□□ 0.15
CACNA1A-253ENST00000637927 ANKMY1Q9P2S6 941 aa15.96■□□□□ 0.15
CACNA1A-253ENST00000637927 COQ4Q9Y3A0 265 aa15.96■□□□□ 0.15
CACNA1A-253ENST00000637927 NFS1Q9Y697 457 aa15.96■□□□□ 0.15
CACNA1A-253ENST00000637927 ARL2-SNX15V9GYD0 113 aa15.96■□□□□ 0.15
CACNA1A-253ENST00000637927 ATG12O94817 140 aa15.96■□□□□ 0.14
CACNA1A-253ENST00000637927 MGAT3Q09327 533 aa15.96■□□□□ 0.14
CACNA1A-253ENST00000637927 UNC50Q53HI1 259 aa15.96■□□□□ 0.14
CACNA1A-253ENST00000637927 OR52R1Q8NGF1 315 aa15.96■□□□□ 0.14
CACNA1A-253ENST00000637927 HSD3B7Q9H2F3 369 aa15.96■□□□□ 0.14
CACNA1A-253ENST00000637927 GAL3ST2Q9H3Q3 398 aa15.96■□□□□ 0.14
CACNA1A-253ENST00000637927 PTTG2Q9NZH5 202 aa15.96■□□□□ 0.14
CACNA1A-253ENST00000637927 FMN2Q9NZ56 1722 aa15.96■□□□□ 0.14
CACNA1A-253ENST00000637927 F13BP05160 661 aa15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 GAAP10253 952 aa15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 ITGAMP11215 1152 aa15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 ZNF689Q96CS4 500 aaPredicted RBP15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 RBMXL1Q96E39 390 aaKnown RBP15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 FAM124BQ9H5Z6 455 aaPredicted RBP15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 HHATLQ9HCP6 504 aa15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 GSRP00390 522 aa15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 PKLRP30613 574 aa15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 SYT3Q9BQG1 590 aa15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 SGPP1Q9BX95 441 aa15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 GALNT9Q9HCQ5 603 aa15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 EHFQ9NZC4 300 aa15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 C3P01024 1663 aa15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 J3KRW8 73 aa15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 MAKP20794 623 aa15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 RNLSQ5VYX0 342 aa15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 OR10A5Q9H207 317 aa15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 OR10A2Q9H208 303 aa15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 NLKQ9UBE8 527 aa15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 FCGR2AP12318 317 aa15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 RPL23AP62750 156 aaKnown RBP15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 MELKQ14680 651 aa15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 ERVMER34-1Q9H9K5 563 aa15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 C1orf226A1L170 272 aa15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 KRBOX1C9JBD0 128 aa15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 ARSDP51689 593 aa15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 SNTB2Q13425 540 aaKnown RBP15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 ERMP1Q7Z2K6 904 aa15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 HLA-CQ95604 372 aa15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 TM7SF3Q9NS93 570 aa15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 V9GYS6 101 aa15.95■□□□□ 0.14
CACNA1A-253ENST00000637927 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 FAM166BA8MTA8 275 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 SEC14L2O76054 403 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 SORBS2O94875 1100 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 CLDN1O95832 211 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 PMPCAQ10713 525 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 NPY5RQ15761 445 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 CREB3L2Q70SY1 520 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 XRN1Q8IZH2 1706 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 ZDHHC14Q8IZN3 488 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 SNIP1Q8TAD8 396 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 NOSIPQ9Y314 301 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 GABARAPH6UMI1 98 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 M0R1B8 84 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 GABARAPO95166 117 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 GJA4P35212 333 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 RABIFP47224 123 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 LINC01599Q8WXQ3 324 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 HCSTQ9UBK5 93 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 NAGKQ9UJ70 344 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 MAN2B1O00754 1011 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 NDUFAF5Q5TEU4 345 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 MOAP1Q96BY2 351 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 MVB12BQ9H7P6 319 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 MED20Q9H944 212 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 OBP2AQ9NY56 170 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 TSPAN11A1L157 253 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 RFC3P40938 356 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 ZNF404Q494X3 552 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 ZNF142P52746 1687 aaPredicted RBP15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 C8BP07358 591 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 NUDT7P0C024 238 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 TAS2R38P59533 333 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 DEFB103AP81534 67 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 TLDC1Q6P9B6 456 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 SLC5A8Q8N695 610 aa15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 IMP4Q96G21 291 aaKnown RBP15.94■□□□□ 0.14
CACNA1A-253ENST00000637927 PLIN4Q96Q06 1357 aa15.93■□□□□ 0.14
CACNA1A-253ENST00000637927 SLC22A5O76082 557 aa15.93■□□□□ 0.14
CACNA1A-253ENST00000637927 ANKRD54Q6NXT1 300 aa15.93■□□□□ 0.14
CACNA1A-253ENST00000637927 VASH2Q86V25 355 aa15.93■□□□□ 0.14
CACNA1A-253ENST00000637927 SDHAF2Q9NX18 166 aa15.93■□□□□ 0.14
CACNA1A-253ENST00000637927 PCDHGB6Q9Y5F9 930 aa15.93■□□□□ 0.14
CACNA1A-253ENST00000637927 MRPL33O75394 65 aaKnown RBP15.93■□□□□ 0.14
CACNA1A-253ENST00000637927 MED6O75586 246 aa15.93■□□□□ 0.14
CACNA1A-253ENST00000637927 ARSBP15848 533 aa15.93■□□□□ 0.14
CACNA1A-253ENST00000637927 C5AR1P21730 350 aa15.93■□□□□ 0.14
CACNA1A-253ENST00000637927 ACKR1Q16570 336 aa15.93■□□□□ 0.14
CACNA1A-253ENST00000637927 TECRLQ5HYJ1 363 aa15.93■□□□□ 0.14
CACNA1A-253ENST00000637927 TIMM29Q9BSF4 260 aa15.93■□□□□ 0.14
CACNA1A-253ENST00000637927 NOX3Q9HBY0 568 aa15.93■□□□□ 0.14
CACNA1A-253ENST00000637927 B4DXG7 233 aa15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms