RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 IMPDH2P12268 514 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 IFI30P13284 250 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 F8A1P23610 371 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 NTRK2Q16620 822 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 TMEM236Q5W0B7 351 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 LAIR2Q6ISS4 152 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 TMPRSS11FQ6ZWK6 438 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 MEX3DQ86XN8 651 aaKnown RBP16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 OR5W2Q8NH69 310 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 RHOXF1Q8NHV9 184 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 CNIH3Q8TBE1 160 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 C3orf49Q96BT1 292 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 SH3YL1Q96HL8 342 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 TIMMDC1Q9NPL8 285 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 IMPAD1Q9NX62 359 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 TUBA8Q9NY65 449 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 BLOC1S6Q9UL45 172 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 ICAM5Q9UMF0 924 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 RNF6Q9Y252 685 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 LOC101059948A0A1B0GTJ6 334 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 MPZL2O60487 215 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 ITGA10O75578 1167 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 CCDC159P0C7I6 412 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 PGCP20142 388 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 CRHBPP24387 322 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 ITPKBP27987 946 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 GPR4P46093 362 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 NOVA1P51513 510 aaKnown RBP16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 P2RX1P51575 399 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 C17orf67Q0P5P2 114 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 APOFQ13790 326 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 BORAQ6PGQ7 559 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 OPN5Q6U736 354 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 KIF18BQ86Y91 864 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 ARMC10Q8N2F6 343 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 PFN4Q8NHR9 129 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 ZNF563Q8TA94 476 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 DUSP19Q8WTR2 217 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 UBE2FQ969M7 185 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 ZNF566Q969W8 418 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 BPIFA2Q96DR5 249 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 SPACA9Q96E40 222 aaPredicted RBP16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 RBM38Q9H0Z9 239 aaKnown RBP16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 P4HTMQ9NXG6 502 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 FBXL4Q9UKA2 621 aa16.13■□□□□ 0.17
SHKBP1-224ENST00000600718 A0A087WXM4 84 aa16.12■□□□□ 0.17
SHKBP1-224ENST00000600718 ADAM10O14672 748 aa16.12■□□□□ 0.17
SHKBP1-224ENST00000600718 SLC1A3P43003 542 aa16.12■□□□□ 0.17
SHKBP1-224ENST00000600718 GIPRP48546 466 aa16.12■□□□□ 0.17
SHKBP1-224ENST00000600718 HLCSP50747 726 aa16.12■□□□□ 0.17
SHKBP1-224ENST00000600718 CSNK2BP67870 215 aa16.12■□□□□ 0.17
SHKBP1-224ENST00000600718 TUBA4AP68366 448 aa16.12■□□□□ 0.17
SHKBP1-224ENST00000600718 CDK5Q00535 292 aa16.12■□□□□ 0.17
SHKBP1-224ENST00000600718 TEKQ02763 1124 aa16.12■□□□□ 0.17
SHKBP1-224ENST00000600718 CBFBQ13951 182 aa16.12■□□□□ 0.17
SHKBP1-224ENST00000600718 ZNF791Q3KP31 576 aaPredicted RBP16.12■□□□□ 0.17
SHKBP1-224ENST00000600718 C12orf73Q69YU5 71 aa16.12■□□□□ 0.17
SHKBP1-224ENST00000600718 RPS19BP1Q86WX3 136 aaKnown RBP16.12■□□□□ 0.17
SHKBP1-224ENST00000600718 MARCH9Q86YJ5 346 aa16.12■□□□□ 0.17
SHKBP1-224ENST00000600718 RAB43Q86YS6 212 aa16.12■□□□□ 0.17
SHKBP1-224ENST00000600718 CLDN22Q8N7P3 220 aa16.12■□□□□ 0.17
SHKBP1-224ENST00000600718 TEX47Q8TBZ9 253 aa16.12■□□□□ 0.17
SHKBP1-224ENST00000600718 ADAMTS14Q8WXS8 1223 aa16.12■□□□□ 0.17
SHKBP1-224ENST00000600718 OSTF1Q92882 214 aa16.12■□□□□ 0.17
SHKBP1-224ENST00000600718 NKD1Q969G9 470 aa16.12■□□□□ 0.17
SHKBP1-224ENST00000600718 C12orf10Q9HB07 376 aa16.12■□□□□ 0.17
SHKBP1-224ENST00000600718 MEPEQ9NQ76 525 aaPredicted RBP16.12■□□□□ 0.17
SHKBP1-224ENST00000600718 RASSF1Q9NS23 344 aa16.12■□□□□ 0.17
SHKBP1-224ENST00000600718 HTR3EA5X5Y0 456 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 UNC119BA6NIH7 251 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 CDRT15L2A8MXV6 281 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 BROXQ5VW32 411 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 DND1Q8IYX4 353 aaKnown RBP16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 PPP1R14BQ96C90 147 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 PHOX2BQ99453 314 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 SLC19A3Q9BZV2 496 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 ADAM19Q9H013 955 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 DSN1Q9H410 356 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 CDCP1Q9H5V8 836 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 SLC25A19Q9HC21 320 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 HHATLQ9HCP6 504 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 SDHAF3Q9NRP4 125 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 C20orf141Q9NUB4 165 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 ZNF226Q9NYT6 803 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 IL20Q9NYY1 176 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 SDK2Q58EX2 2172 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 ELOA3DA6NLF2 546 aaPredicted RBP16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 SLC1A7O00341 560 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 CDC42EP2O14613 210 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 TP53I11O14683 189 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 ATP6V1B1P15313 513 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 MAKP20794 623 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 PTNP21246 168 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 SMSP52788 366 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 GAS1P54826 345 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 MLF1P58340 268 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 CHAF1BQ13112 559 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 GINS1Q14691 196 aa16.11■□□□□ 0.17
SHKBP1-224ENST00000600718 ELOA3BQ3SY89 546 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 168.9 ms