RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 SMNDC1O75940 238 aaKnown RBP eCLIP10.61□□□□□ -0.71
RAB5C-204ENST00000547517 AQP8O94778 261 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 NID1P14543 1247 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 PPIBP23284 216 aaKnown RBP10.61□□□□□ -0.71
RAB5C-204ENST00000547517 SLC7A1P30825 629 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 CPOXP36551 454 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 DLX5P56178 289 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 MERTKQ12866 999 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 MYBPHQ13203 477 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 SLC25A53Q5H9E4 307 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 PDSS1Q5T2R2 415 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 METTL21CQ5VZV1 264 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 AP1ARQ63HQ0 302 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 C3orf33Q6P1S2 294 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 VWA1Q6PCB0 445 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 ZNF836Q6ZNA1 936 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 VRK2Q86Y07 508 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 DMRTC2Q8IXT2 367 aaPredicted RBP10.61□□□□□ -0.71
RAB5C-204ENST00000547517 CMIPQ8IY22 773 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 C10orf111Q8N326 155 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 OR52P1PQ8NH57 321 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 TMEM234Q8WY98 164 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 RNASE6Q93091 150 aaKnown RBP10.61□□□□□ -0.71
RAB5C-204ENST00000547517 CPPED1Q9BRF8 314 aaPredicted RBP10.61□□□□□ -0.71
RAB5C-204ENST00000547517 SRXN1Q9BYN0 137 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 IKZF5Q9H5V7 419 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 COQ10BQ9H8M1 238 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 MTHFD2LQ9H903 347 aaPredicted RBP10.61□□□□□ -0.71
RAB5C-204ENST00000547517 PAQR5Q9NXK6 330 aaPredicted RBP10.61□□□□□ -0.71
RAB5C-204ENST00000547517 ZNF443Q9Y2A4 671 aaPredicted RBP10.61□□□□□ -0.71
RAB5C-204ENST00000547517 NDUFAF1Q9Y375 327 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 A0A1W2PNR3 127 aa10.6□□□□□ -0.71
RAB5C-204ENST00000547517 C5orf58C9J3I9 102 aa10.6□□□□□ -0.71
RAB5C-204ENST00000547517 ETV2O00321 342 aaPredicted RBP10.6□□□□□ -0.71
RAB5C-204ENST00000547517 PLGP00747 810 aaPredicted RBP10.6□□□□□ -0.71
RAB5C-204ENST00000547517 BMP2P12643 396 aa10.6□□□□□ -0.71
RAB5C-204ENST00000547517 IDH2P48735 452 aaKnown RBP10.6□□□□□ -0.71
RAB5C-204ENST00000547517 NFYCQ13952 458 aa10.6□□□□□ -0.71
RAB5C-204ENST00000547517 ZNF239Q16600 458 aaKnown RBP10.6□□□□□ -0.71
RAB5C-204ENST00000547517 TMEM176BQ3YBM2 270 aaPredicted RBP10.6□□□□□ -0.71
RAB5C-204ENST00000547517 FBXL19-AS1Q494R0 122 aa10.6□□□□□ -0.71
RAB5C-204ENST00000547517 DLEU7Q6UYE1 221 aa10.6□□□□□ -0.71
RAB5C-204ENST00000547517 PLEKHM3Q6ZWE6 761 aa10.6□□□□□ -0.71
RAB5C-204ENST00000547517 RETREG3Q86VR2 466 aa10.6□□□□□ -0.71
RAB5C-204ENST00000547517 LSRQ86X29 649 aaPredicted RBP10.6□□□□□ -0.71
RAB5C-204ENST00000547517 ZNF295-AS1Q8N0V1 137 aa10.6□□□□□ -0.71
RAB5C-204ENST00000547517 NFKBIDQ8NI38 313 aa10.6□□□□□ -0.71
RAB5C-204ENST00000547517 BBS10Q8TAM1 723 aa10.6□□□□□ -0.71
RAB5C-204ENST00000547517 OSTF1Q92882 214 aa10.6□□□□□ -0.71
RAB5C-204ENST00000547517 CPNE4Q96A23 557 aaPredicted RBP10.6□□□□□ -0.71
RAB5C-204ENST00000547517 OR5B2Q96R09 309 aa10.6□□□□□ -0.71
RAB5C-204ENST00000547517 RBM24Q9BX46 236 aaKnown RBP10.6□□□□□ -0.71
RAB5C-204ENST00000547517 PIGMQ9H3S5 423 aa10.6□□□□□ -0.71
RAB5C-204ENST00000547517 SERINC1Q9NRX5 453 aa10.6□□□□□ -0.71
RAB5C-204ENST00000547517 ACER3Q9NUN7 267 aa10.6□□□□□ -0.71
RAB5C-204ENST00000547517 RLIMQ9NVW2 624 aa10.6□□□□□ -0.71
RAB5C-204ENST00000547517 GALNT8Q9NY28 637 aa10.6□□□□□ -0.71
RAB5C-204ENST00000547517 JKAMPQ9P055 326 aa10.6□□□□□ -0.71
RAB5C-204ENST00000547517 CLEC4AQ9UMR7 237 aa10.6□□□□□ -0.71
RAB5C-204ENST00000547517 CORO2BQ9UQ03 480 aa10.6□□□□□ -0.71
RAB5C-204ENST00000547517 INTS1Q8N201 2190 aaKnown RBP10.6□□□□□ -0.71
RAB5C-204ENST00000547517 HEATR5AQ86XA9 2040 aa10.6□□□□□ -0.71
RAB5C-204ENST00000547517 MYO9AB2RTY4 2548 aa10.59□□□□□ -0.71
RAB5C-204ENST00000547517 FBN2P35556 2912 aa10.59□□□□□ -0.71
RAB5C-204ENST00000547517 PKDREJQ9NTG1 2253 aa10.59□□□□□ -0.71
RAB5C-204ENST00000547517 A0A0G2JPF8 293 aa10.59□□□□□ -0.71
RAB5C-204ENST00000547517 CDHR4A6H8M9 788 aa10.59□□□□□ -0.71
RAB5C-204ENST00000547517 CFAP73A6NFT4 308 aa10.59□□□□□ -0.71
RAB5C-204ENST00000547517 EVPLLA8MZ36 301 aa10.59□□□□□ -0.71
RAB5C-204ENST00000547517 HNRNPCL2B2RXH8 293 aa10.59□□□□□ -0.71
RAB5C-204ENST00000547517 HNRNPCL3B7ZW38 293 aa10.59□□□□□ -0.71
RAB5C-204ENST00000547517 SYT5O00445 386 aa10.59□□□□□ -0.71
RAB5C-204ENST00000547517 HNRNPCL1O60812 293 aaKnown RBP10.59□□□□□ -0.71
RAB5C-204ENST00000547517 CRHP06850 196 aa10.59□□□□□ -0.71
RAB5C-204ENST00000547517 THBS1P07996 1170 aa10.59□□□□□ -0.71
RAB5C-204ENST00000547517 GKN3PP0CG01 181 aa10.59□□□□□ -0.71
RAB5C-204ENST00000547517 HNRNPCL4P0DMR1 293 aa10.59□□□□□ -0.71
RAB5C-204ENST00000547517 ARAFP10398 606 aa10.59□□□□□ -0.71
RAB5C-204ENST00000547517 UQCRBP14927 111 aa10.59□□□□□ -0.71
RAB5C-204ENST00000547517 SSTR2P30874 369 aa10.59□□□□□ -0.71
RAB5C-204ENST00000547517 KIR2DL2P43627 348 aaPredicted RBP10.59□□□□□ -0.71
RAB5C-204ENST00000547517 CARD18P57730 90 aa10.59□□□□□ -0.71
RAB5C-204ENST00000547517 MTPNP58546 118 aa10.59□□□□□ -0.71
RAB5C-204ENST00000547517 EEF1A1P68104 462 aaKnown RBP10.59□□□□□ -0.71
RAB5C-204ENST00000547517 EPS8Q12929 822 aa10.59□□□□□ -0.71
RAB5C-204ENST00000547517 CAPRIN1Q14444 709 aaKnown RBP10.59□□□□□ -0.71
RAB5C-204ENST00000547517 LARS2Q15031 903 aaKnown RBP10.59□□□□□ -0.71
RAB5C-204ENST00000547517 RNF220Q5VTB9 566 aa10.59□□□□□ -0.71
RAB5C-204ENST00000547517 GRINAQ7Z429 371 aa10.59□□□□□ -0.71
RAB5C-204ENST00000547517 BTLAQ7Z6A9 289 aa10.59□□□□□ -0.71
RAB5C-204ENST00000547517 MED12LQ86YW9 2145 aa10.59□□□□□ -0.71
RAB5C-204ENST00000547517 DPP10Q8N608 796 aa10.59□□□□□ -0.71
RAB5C-204ENST00000547517 ROBO4Q8WZ75 1007 aa10.59□□□□□ -0.71
RAB5C-204ENST00000547517 PMM1Q92871 262 aa10.59□□□□□ -0.71
RAB5C-204ENST00000547517 REXO5Q96IC2 774 aaKnown RBP10.59□□□□□ -0.71
RAB5C-204ENST00000547517 ZNF317Q96PQ6 595 aaPredicted RBP10.59□□□□□ -0.71
RAB5C-204ENST00000547517 ZNF559Q9BR84 538 aa10.59□□□□□ -0.71
RAB5C-204ENST00000547517 CCDC106Q9BWC9 280 aa10.59□□□□□ -0.71
RAB5C-204ENST00000547517 OPN3Q9H1Y3 402 aaPredicted RBP10.59□□□□□ -0.71
RAB5C-204ENST00000547517 TIGARQ9NQ88 270 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms