RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 UBL7Q96S82 380 aaPredicted RBP4.8□□□□□ -1.64
UBE4A-203ENST00000545354 DIRC2Q96SL1 478 aa4.8□□□□□ -1.64
UBE4A-203ENST00000545354 PTPN18Q99952 460 aa4.8□□□□□ -1.64
UBE4A-203ENST00000545354 SULT4A1Q9BR01 284 aa4.8□□□□□ -1.64
UBE4A-203ENST00000545354 SSBP4Q9BWG4 385 aaPredicted RBP4.8□□□□□ -1.64
UBE4A-203ENST00000545354 MEAF6Q9HAF1 191 aa4.8□□□□□ -1.64
UBE4A-203ENST00000545354 C6orf50Q9HD87 102 aa4.8□□□□□ -1.64
UBE4A-203ENST00000545354 MIEF1Q9NQG6 463 aa4.8□□□□□ -1.64
UBE4A-203ENST00000545354 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.8□□□□□ -1.64
UBE4A-203ENST00000545354 IL17BQ9UHF5 180 aa4.8□□□□□ -1.64
UBE4A-203ENST00000545354 MRTO4Q9UKD2 239 aaKnown RBP4.8□□□□□ -1.64
UBE4A-203ENST00000545354 FBXL3Q9UKT7 428 aa4.8□□□□□ -1.64
UBE4A-203ENST00000545354 SAMD4AQ9UPU9 718 aaKnown RBP4.8□□□□□ -1.64
UBE4A-203ENST00000545354 DRG1Q9Y295 367 aaKnown RBP4.8□□□□□ -1.64
UBE4A-203ENST00000545354 CARHSP1Q9Y2V2 147 aaKnown RBP4.8□□□□□ -1.64
UBE4A-203ENST00000545354 EDDM13A0A1B0GTR0 161 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 C7orf72A4D263 438 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 H3BN98 237 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 SMLR1H3BR10 107 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 DVL1O14640 695 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 PPIHO43447 177 aaKnown RBP4.79□□□□□ -1.64
UBE4A-203ENST00000545354 PLRG1O43660 514 aaKnown RBP4.79□□□□□ -1.64
UBE4A-203ENST00000545354 B3GALT2O43825 422 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 SAP30O75446 220 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 SIX3O95343 332 aaPredicted RBP4.79□□□□□ -1.64
UBE4A-203ENST00000545354 MT-CO2P00403 227 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 CD5P06127 495 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 HIST1H2AGP0C0S8 130 aaPredicted RBP4.79□□□□□ -1.64
UBE4A-203ENST00000545354 PET100P0DJ07 73 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 SNRPBP14678 240 aaKnown RBP4.79□□□□□ -1.64
UBE4A-203ENST00000545354 HIST1H2ADP20671 130 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 RPL10P27635 214 aaKnown RBP4.79□□□□□ -1.64
UBE4A-203ENST00000545354 HTR2AP28223 471 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 ICAM3P32942 547 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 SSTR5P35346 364 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 GGT5P36269 586 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 TTPAP49638 278 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 CDKN2DP55273 166 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 OR4D2P58180 307 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 ERVFRD-1P60508 538 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 ERVFC1-1P60608 527 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 JAG1P78504 1218 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 UBE2V1Q13404 147 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 HMGN3Q15651 99 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 TAZQ16635 292 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 NCMAPQ5T1S8 102 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 LGSNQ5TDP6 509 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 CD276Q5ZPR3 534 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 HIST2H2AA3Q6FI13 130 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 WDR88Q6ZMY6 472 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 ACOT7LQ6ZUV0 252 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 MED25Q71SY5 747 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 CD163Q86VB7 1156 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 TRAPPC5Q8IUR0 188 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 NALCNQ8IZF0 1738 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 Q8N402 240 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 SAMD12Q8N8I0 201 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 NUBPLQ8TB37 319 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 ROPN1LQ96C74 230 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 LGALS12Q96DT0 336 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 MRPS24Q96EL2 167 aaKnown RBP4.79□□□□□ -1.64
UBE4A-203ENST00000545354 TCTN2Q96GX1 697 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 PEX11GQ96HA9 241 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 SMIM8Q96KF7 97 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 HIST1H2AHQ96KK5 128 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 POM121L2Q96KW2 1035 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 KREMEN1Q96MU8 473 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 OR5B12Q96R08 314 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 CSF3RQ99062 836 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 HIST1H2AJQ99878 128 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 H2AFJQ9BTM1 129 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 RAB34Q9BZG1 259 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.79□□□□□ -1.64
UBE4A-203ENST00000545354 MS4A7Q9GZW8 240 aaPredicted RBP4.79□□□□□ -1.64
UBE4A-203ENST00000545354 SIK2Q9H0K1 926 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 ACSS3Q9H6R3 686 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 MTHFD2LQ9H903 347 aaPredicted RBP4.79□□□□□ -1.64
UBE4A-203ENST00000545354 WDR54Q9H977 334 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 AKIRIN1Q9H9L7 192 aaPredicted RBP4.79□□□□□ -1.64
UBE4A-203ENST00000545354 DNAJC4Q9NNZ3 241 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 OR2S2Q9NQN1 319 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 AHSPQ9NZD4 102 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 ATP10DQ9P241 1426 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 NENFQ9UMX5 172 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 SRPK3Q9UPE1 567 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 TNNQ9UQP3 1299 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 SLC35A3Q9Y2D2 325 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 TMED3Q9Y3Q3 217 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 MYH1P12882 1939 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 MYH6P13533 1939 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 DISP2A7MBM2 1401 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 TRBV7-9A0A0J9YWB2 115 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 MYOCOSA0A1B0GUC4 107 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 B4DXG7 233 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 RNASEK-C17orf49H0YIS7 233 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 EGFP01133 1207 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 GH1P01241 217 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 TCRBP04435 133 aa4.79□□□□□ -1.64
UBE4A-203ENST00000545354 SLC2A2P11168 524 aaPredicted RBP4.79□□□□□ -1.64
UBE4A-203ENST00000545354 FOLR1P15328 257 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms