RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	PRRG4	Q9BZD6	226 aa		11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	SLC38A1	Q9H2H9	487 aa		11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	SAR1A	Q9NR31	198 aa		11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	ST6GALNAC2	Q9UJ37	374 aa		11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	KCNE5	Q9UJ90	142 aa		11.44	□□□□□ -0.58
FDPS-204	ENST00000461507	LOC100653049	A0A140TA62	436 aa		11.43	□□□□□ -0.58
FDPS-204	ENST00000461507		H0YC42	278 aa		11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	LINC01387	J3KSC0	135 aa		11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	MRAS	O14807	208 aa		11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	KRT34	O76011	436 aa		11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	RCBTB2	O95199	551 aa		11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	DBI	P07108	87 aa	Known RBP	11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	PGC	P20142	388 aa		11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	LSP1	P33241	339 aa		11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	MAGEA8	P43361	318 aa		11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	PCYT1A	P49585	367 aa		11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	AGFG1	P52594	562 aa	Known RBP	11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	MVD	P53602	400 aa		11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	TPD52	P55327	224 aa	Predicted RBP	11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	EEFSEC	P57772	596 aa	Known RBP	11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	KCNJ10	P78508	379 aa		11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	FOXF2	Q12947	444 aa		11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	SKP2	Q13309	424 aa		11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	TOMM34	Q15785	309 aa	Predicted RBP	11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	GLYR1	Q49A26	553 aa	Predicted RBP	11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	LIN52	Q52LA3	116 aa		11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	REP15	Q6BDI9	236 aa		11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	RETREG3	Q86VR2	466 aa		11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	VRK2	Q86Y07	508 aa		11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	MSRB3	Q8IXL7	192 aa		11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	OR52P1P	Q8NH57	321 aa		11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	SLC38A5	Q8WUX1	472 aa		11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	ZG16B	Q96DA0	208 aa		11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	CGREF1	Q99674	301 aa		11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	NPAS1	Q99742	590 aa		11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	LAT2	Q9GZY6	243 aa		11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	MTHFD2L	Q9H903	347 aa	Predicted RBP	11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	AP4B1	Q9Y6B7	739 aa		11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	ZNF469	Q96JG9	3925 aa	Predicted RBP	11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	PCNX3	Q9H6A9	2034 aa		11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	ACAN	P16112	2415 aa		11.43	□□□□□ -0.58
FDPS-204	ENST00000461507	GMNC	A6NCL1	334 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	TUBAL3	A6NHL2	446 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	AGAP5	A6NIR3	686 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	SLC22A20	A6NK97	555 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	EEF1E1-BLOC1S5	C9J1V9	151 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	TNFSF11	O14788	317 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	EEF1E1	O43324	174 aa	Known RBP	11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	CCDC22	O60826	627 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	SYNGR4	O95473	234 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	EPX	P11678	715 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	UQCRB	P14927	111 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	CCNA2	P20248	432 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	SLC6A2	P23975	617 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	AQP1	P29972	269 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	EIF1	P41567	113 aa	Known RBP	11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	CLDN20	P56880	219 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	EEF1A1	P68104	462 aa	Known RBP	11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	MERTK	Q12866	999 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	CYLC2	Q14093	348 aa	Predicted RBP	11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	SCARB2	Q14108	478 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	LARS2	Q15031	903 aa	Known RBP	11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	PDSS1	Q5T2R2	415 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	MRPL2	Q5T653	305 aa	Known RBP	11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	EEF1A1P5	Q5VTE0	462 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	PAMR1	Q6UXH9	720 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	CDC20B	Q86Y33	519 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	GCNT2	Q8N0V5	402 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	GTPBP8	Q8N3Z3	284 aa	Predicted RBP	11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	POU5F2	Q8N7G0	328 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	BBS10	Q8TAM1	723 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	GPR119	Q8TDV5	335 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	TMEM234	Q8WY98	164 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	CNOT9	Q92600	299 aa	Known RBP	11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	MBD6	Q96DN6	1003 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	ZNF845	Q96IR2	970 aa	Predicted RBP	11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	CPPED1	Q9BRF8	314 aa	Predicted RBP	11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	SLC39A3	Q9BRY0	314 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	TMUB1	Q9BVT8	246 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	SAP130	Q9H0E3	1048 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	PIGM	Q9H3S5	423 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	PIF1	Q9H611	641 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	ARMC7	Q9H6L4	198 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	A4GALT	Q9NPC4	353 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	SLC52A3	Q9NQ40	469 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	SLC13A4	Q9UKG4	626 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	ICAM5	Q9UMF0	924 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	ZNF232	Q9UNY5	417 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	ANGPT4	Q9Y264	503 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	ZNF443	Q9Y2A4	671 aa	Predicted RBP	11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	GPC6	Q9Y625	555 aa	Predicted RBP	11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	ZFHX3	Q15911	3703 aa		11.42	□□□□□ -0.58
FDPS-204	ENST00000461507	FLNA	P21333	2647 aa	Known RBP	11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	NF1	P21359	2839 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	TNFSF12-TNFSF13	A0A0A6YY99	330 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507		A0A0G2JPF8	293 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	GJE1	A6NN92	205 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	BBIP1	A8MTZ0	92 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	HNRNPCL2	B2RXH8	293 aa		11.41	□□□□□ -0.58
FDPS-204	ENST00000461507	HNRNPCL3	B7ZW38	293 aa		11.41	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms