RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 POMGNT2Q8NAT1 580 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 PHYHIPQ92561 330 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 CNOT9Q92600 299 aaKnown RBP11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 CREB3L1Q96BA8 519 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 CMTM3Q96MX0 182 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 ZNF578Q96N58 590 aaPredicted RBP11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 IFT27Q9BW83 186 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 C8orf33Q9H7E9 229 aaPredicted RBP11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 MCCC2Q9HCC0 563 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 CHRNA9Q9UGM1 479 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 CA5BQ9Y2D0 317 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 ARHGEF17Q96PE2 2063 aaPredicted RBP11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 NUP210LQ5VU65 1888 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 TMEM131Q92545 1883 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 OR5K3A6NET4 321 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 EPOPA6NHQ4 379 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 EFCAB7A8K855 629 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 FOXS1O43638 330 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 RFPL3O75679 317 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 SERPINA3P01011 423 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 ELK1P19419 428 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 EN2P19622 333 aaPredicted RBP11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 ERP29P30040 261 aaKnown RBP11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 GALNSP34059 522 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 EMDP50402 254 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 TPMTP51580 245 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 RAB25P57735 213 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 PSG6Q00889 435 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 IL18Q14116 193 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 EXOSC7Q15024 291 aaKnown RBP11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 RD3Q7Z3Z2 195 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 C11orf74Q86VG3 221 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 SLC44A3Q8N4M1 653 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 OR4C6Q8NH72 309 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 ABHD4Q8TB40 342 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 RPS4Y2Q8TD47 263 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 TRIM63Q969Q1 353 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 VSTM2LQ96N03 204 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 SEMA6CQ9H3T2 930 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 RERGLQ9H628 205 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 MED20Q9H944 212 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 CERS4Q9HA82 394 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 TMEM165Q9HC07 324 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 ZNF275Q9NSD4 429 aaPredicted RBP11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 CLEC1BQ9P126 229 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 USP36Q9P275 1121 aaKnown RBP11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 ST6GALNAC2Q9UJ37 374 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 POMT2Q9UKY4 750 aa11.55□□□□□ -0.56
ECHDC1-209ENST00000454591 ATG2BQ96BY7 2078 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 ZNF860A6NHJ4 632 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 PRAMEF26H0Y7S4 382 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 TFECO14948 347 aaPredicted RBP11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 ARPC3O15145 178 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 ORC5O43913 435 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 PPM1BO75688 479 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 GATBO75879 557 aaKnown RBP11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 NCR1O76036 304 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 C1QBP02746 253 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 OR2T7P0C7T2 308 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 CHRNB1P11230 501 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 FUT1P19526 365 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 SLC6A1P30531 599 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 SSTR4P31391 388 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 NUDT1P36639 197 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 GPR143P51810 404 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 ATP12AP54707 1039 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 SKP1P63208 163 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 ID2Q02363 134 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 TNK1Q13470 666 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 IL10RAQ13651 578 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 CRMP1Q14194 572 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 TCEA2Q15560 299 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 ZNHIT3Q15649 155 aaPredicted RBP11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 TATDN3Q17R31 274 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 CCDC58Q4VC31 144 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 YIF1BQ5BJH7 314 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 SLC35D3Q5M8T2 416 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 PYHIN1Q6K0P9 492 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 SFXN4Q6P4A7 337 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 ULK3Q6PHR2 472 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 FIGNL1Q6PIW4 674 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 BAIAP2L2Q6UXY1 529 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 Q6ZSR6 202 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 ZAR1Q86SH2 424 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 OOSP2Q86WS3 158 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 NLGN4YQ8NFZ3 816 aaPredicted RBP11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 OR52R1Q8NGF1 315 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 OR5T3Q8NGG3 340 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 OR2T27Q8NH04 317 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 OR10G6Q8NH81 332 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 LILRB4Q8NHJ6 448 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 SMPDL3BQ92485 455 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 GPX7Q96SL4 187 aaPredicted RBP11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 DDOQ99489 341 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 SLC19A3Q9BZV2 496 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 ENAMQ9NRM1 1142 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 DDX28Q9NUL7 540 aaKnown RBP11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 HRASLS2Q9NWW9 162 aa11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 NUFIP1Q9UHK0 495 aaKnown RBP11.54□□□□□ -0.56
ECHDC1-209ENST00000454591 TRBV23OR9-2A0A075B6M9 112 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms