RNA–Protein interactions for RNA: ENST00000453858.1

SBDSP1-204, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

BASIC

Gene SBDSP1, Length 737 nt, Biotype transcribed unprocessed pseudogene, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-204ENST00000453858 PPP1R3AQ16821 1122 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 SLC9B1Q4ZJI4 515 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 C4orf46Q504U0 113 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 ARMCX4Q5H9R4 360 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 GPR157Q5UAW9 335 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 Q6ZNX1 250 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 NUP54Q7Z3B4 507 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 CNTN4Q8IWV2 1026 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 TUSC5Q8IXB3 177 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 SLC15A3Q8IY34 581 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 SPARTQ8N0X7 666 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 NKAPQ8N5F7 415 aaKnown RBP4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 RNF10Q8N5U6 811 aaKnown RBP4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 OR2C3Q8N628 320 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 RNF152Q8N8N0 203 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 FAM47BQ8NA70 645 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 SDR9C7Q8NEX9 313 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 TOR1AIP2Q8NFQ8 470 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 OR4S1Q8NGB4 309 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 OR52N5Q8NH56 324 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 DOK4Q8TEW6 326 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 PPWD1Q96BP3 646 aaKnown RBP4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 SLC47A1Q96FL8 570 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 TIGD1Q96MW7 591 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 MUS81Q96NY9 551 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 GAL3ST4Q96RP7 486 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 FERMT1Q9BQL6 677 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 ZNF670Q9BS34 389 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 ACTRT3Q9BYD9 372 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 TRIM5Q9C035 493 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 PCDHAC1Q9H158 963 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 STMN4Q9H169 189 aaPredicted RBP4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 SPNS1Q9H2V7 528 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 TMPRSS5Q9H3S3 457 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 METTL7AQ9H8H3 244 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 ZNF275Q9NSD4 429 aaPredicted RBP4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 LEF1Q9UJU2 399 aaPredicted RBP4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 AUP1Q9Y679 476 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 POMT1Q9Y6A1 747 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 FAT4Q6V0I7 4981 aa4.39□□□□□ -1.71
SBDSP1-204ENST00000453858 A0A1W2PR80 420 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 TRBC2A0A5B9 178 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 SYCE3A1L190 88 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 CCDC162PA2VCL2 907 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 OR6C76A6NM76 312 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 HMGB1P1B2RPK0 211 aaPredicted RBP4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 TMEM233B4DJY2 109 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 F8W8V4 182 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 PIP5K1BO14986 540 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 OR1F1O43749 312 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 TBX6O95947 436 aaPredicted RBP4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 MELTFP08582 738 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 CCDC159P0C7I6 412 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 FERP16591 822 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 TNFSF4P23510 183 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 IMPA1P29218 277 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 HOXD3P31249 432 aaPredicted RBP4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 AHRP35869 848 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 OR3A2P47893 321 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 VEGFCP49767 419 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 LIM2P55344 173 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 DSCR4P56555 118 aaPredicted RBP4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 RPS3AP61247 264 aaKnown RBP4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 RPP38P78345 283 aaKnown RBP4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 ID2Q02363 134 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 POU3F1Q03052 451 aaPredicted RBP4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 EMX1Q04741 257 aaPredicted RBP4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 PAX8Q06710 450 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 STX4Q12846 297 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 ZNF154Q13106 437 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 EFTUD2Q15029 972 aaKnown RBP eCLIP4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 SGCBQ16585 318 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 ERCC6LQ2NKX8 1250 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 PLAC9Q5JTB6 97 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 FAM209BQ5JX69 171 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 SH2D4BQ5SQS7 431 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 OR5M10Q6IEU7 315 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 RGS7BPQ6MZT1 257 aaPredicted RBP4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 Q6ZTK2 550 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 PIWIL4Q7Z3Z4 852 aaKnown RBP4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 PRR22Q8IZ63 422 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 C11orf44Q8N8P7 122 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 FADS6Q8N9I5 356 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 BBOF1Q8ND07 529 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 PAPD5Q8NDF8 572 aaKnown RBP4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 OR52B6Q8NGF0 335 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 OR5M1Q8NGP8 315 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 OR10D3Q8NH80 312 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 FBXO30Q8TB52 745 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 NELFBQ8WX92 580 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 PANX2Q96RD6 677 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 APOL2Q9BQE5 337 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 OSBPL11Q9BXB4 747 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 ANKZF1Q9H8Y5 726 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 NOX4Q9NPH5 578 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 SNX15Q9NRS6 342 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 ABCF3Q9NUQ8 709 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 RMND1Q9NWS8 449 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 EHD3Q9NZN3 535 aa4.38□□□□□ -1.71
SBDSP1-204ENST00000453858 SLC17A7Q9P2U7 560 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms