RNA–Protein interactions for RNA: ENST00000417997.1

HMGB3P20-201, Transcript of high mobility group box 3 pseudogene 20, humanhuman

BASIC

Gene HMGB3P20, Length 600 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P20-201ENST00000417997 TGM7Q96PF1 710 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 BBS4Q96RK4 519 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 SERINC2Q96SA4 455 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 CD180Q99467 661 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 C1QTNF4Q9BXJ3 329 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 UGT2B28Q9BY64 529 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 ABCG4Q9H172 646 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 YY1AP1Q9H869 796 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 DDX31Q9H8H2 851 aaKnown RBP3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 ERVMER34-1Q9H9K5 563 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 UCK1Q9HA47 277 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 TPT1P8Q9HAU6 139 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 PLEKHA2Q9HB19 425 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 CACYBPQ9HB71 228 aaKnown RBP3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 ANKHQ9HCJ1 492 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 SLC52A3Q9NQ40 469 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 SLC22A11Q9NSA0 550 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 TAS2R9Q9NYW1 312 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 SLC25A37Q9NYZ2 338 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 DLGAP2Q9P1A6 1054 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 EPHA6Q9UF33 1036 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 CD300AQ9UGN4 299 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 RPS6KA6Q9UK32 745 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 FBXW2Q9UKT8 454 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 SAMD4AQ9UPU9 718 aaKnown RBP3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 OSGIN2Q9Y236 505 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 ANGPT4Q9Y264 503 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 C15orf41Q9Y2V0 281 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 AP4S1Q9Y587 144 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 CSNK1G3Q9Y6M4 447 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZNF780BQ9Y6R6 833 aa3.51□□□□□ -1.85
HMGB3P20-201ENST00000417997 TRIOBPQ9H2D6 2365 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 A0A1B0GTQ1 180 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 TCRBV3S1A0A5B6 114 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 CLEC18AA5D8T8 446 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZNF860A6NHJ4 632 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 SLC9B1P1A6NJY1 282 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 C5orf58C9J3I9 102 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 H0YGG7 62 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 GNGT2O14610 69 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 P2RX6O15547 441 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 TNFSF14O43557 240 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 NUDT21O43809 227 aaKnown RBP3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 KIF1CO43896 1103 aaKnown RBP3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 TBX19O60806 448 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 CTSVO60911 334 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 PRKRAO75569 313 aaKnown RBP3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 TIPRLO75663 272 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 PDE9AO76083 593 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 BMP10O95393 424 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 PPP1R3DO95685 299 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZNF682O95780 498 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 AIFM1O95831 613 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 SERPINA1P01009 418 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 IL1AP01583 271 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 CSTBP04080 98 aaKnown RBP3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZCCHC18P0CG32 403 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 ZNF12P17014 697 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 ALOX12P18054 663 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 IL1RNP18510 177 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 UQCRC2P22695 453 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 FASP25445 335 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 EPHA8P29322 1005 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 ALDH4A1P30038 563 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 PPP2R1BP30154 601 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 PCGF2P35227 344 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 CRATP43155 626 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 HSPA13P48723 471 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 KHKP50053 298 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 NCBP2P52298 156 aaKnown RBP eCLIP3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 GFERP55789 205 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 DSTNP60981 165 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 ARF3P61204 181 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 HBA1P69905 142 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 OLR1P78380 273 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 HPCAP84074 193 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 MS4A2Q01362 244 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 RELAQ04206 551 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 EEF1A2Q05639 463 aaKnown RBP3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 FADDQ13158 208 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 BLMHQ13867 455 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 SIM2Q14190 667 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 LRRC36Q1X8D7 754 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 ADPRMQ3LIE5 342 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 AMZ1Q400G9 498 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 DEFB134Q4QY38 66 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 INTS11Q5TA45 600 aaKnown RBP3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 NDUFAF5Q5TEU4 345 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 IRAK1BP1Q5VVH5 260 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 LPCAT4Q643R3 524 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 FRMPD2BQ6IN97 320 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 NIPAL1Q6NVV3 410 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 BHLHB9Q6PI77 547 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 IZUMO2Q6UXV1 221 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 VN1R4Q7Z5H5 301 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 SLC30A8Q8IWU4 369 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 MSRB3Q8IXL7 192 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 SLC35F3Q8IY50 421 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 GALNT15Q8N3T1 639 aa3.5□□□□□ -1.85
HMGB3P20-201ENST00000417997 TMEM105Q8N8V8 129 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms