RNA–Protein interactions for RNA: ENST00000416781.1

TTC39DP-201, Transcript of tetratricopeptide repeat domain 39D, pseudogene, humanhuman

BASIC

Gene TTC39DP, Length 1,688 nt, Biotype unitary pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39DP-201ENST00000416781 MAP1LC3CQ9BXW4 147 aa4.87□□□□□ -1.63
TTC39DP-201ENST00000416781 KAT8Q9H7Z6 458 aaKnown RBP4.87□□□□□ -1.63
TTC39DP-201ENST00000416781 RANGRFQ9HD47 186 aaPredicted RBP4.87□□□□□ -1.63
TTC39DP-201ENST00000416781 IL1RAPQ9NPH3 570 aa4.87□□□□□ -1.63
TTC39DP-201ENST00000416781 IFT46Q9NQC8 304 aa4.87□□□□□ -1.63
TTC39DP-201ENST00000416781 THSD1Q9NS62 852 aa4.87□□□□□ -1.63
TTC39DP-201ENST00000416781 SMOXQ9NWM0 555 aa4.87□□□□□ -1.63
TTC39DP-201ENST00000416781 TMEM9Q9P0T7 183 aa4.87□□□□□ -1.63
TTC39DP-201ENST00000416781 IFNKQ9P0W0 207 aa4.87□□□□□ -1.63
TTC39DP-201ENST00000416781 MLXQ9UH92 298 aa4.87□□□□□ -1.63
TTC39DP-201ENST00000416781 RWDD2AQ9UIY3 292 aa4.87□□□□□ -1.63
TTC39DP-201ENST00000416781 KLHL21Q9UJP4 597 aa4.87□□□□□ -1.63
TTC39DP-201ENST00000416781 NXT1Q9UKK6 140 aaKnown RBP4.87□□□□□ -1.63
TTC39DP-201ENST00000416781 GOLT1BQ9Y3E0 138 aa4.87□□□□□ -1.63
TTC39DP-201ENST00000416781 WNK3Q9BYP7 1800 aa4.87□□□□□ -1.63
TTC39DP-201ENST00000416781 TAF1P21675 1872 aa4.87□□□□□ -1.63
TTC39DP-201ENST00000416781 ARHGEF10O15013 1369 aa4.87□□□□□ -1.63
TTC39DP-201ENST00000416781 ANKRD30BQ9BXX2 1392 aa4.87□□□□□ -1.63
TTC39DP-201ENST00000416781 FAM135BQ49AJ0 1406 aa4.87□□□□□ -1.63
TTC39DP-201ENST00000416781 CUX2O14529 1486 aa4.87□□□□□ -1.63
TTC39DP-201ENST00000416781 ARHGEF17Q96PE2 2063 aaPredicted RBP4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 KCNE1BA0A087WTH5 132 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 C9orf170A2RU37 121 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 SMCO3A2RU48 225 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 PTGESO14684 152 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 PRMT5O14744 637 aaPredicted RBP4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 SRPX2O60687 465 aaPredicted RBP4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 SRP72O76094 671 aaKnown RBP4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 KCNE1P15382 129 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 CYP11B1P15538 503 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 STOMP27105 288 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 CYLC1P35663 651 aaPredicted RBP4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 HSPA2P54652 639 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 NUTF2P61970 127 aaKnown RBP4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 HERVK_113P63132 956 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 TFAMQ00059 246 aaKnown RBP4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 CDR2Q01850 454 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 SREBF2Q12772 1141 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 TNXAQ16473 311 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 NDUFA9Q16795 377 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 PTPN20Q4JDL3 420 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 ZNF658BQ4V348 819 aaPredicted RBP4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 TNFAIP8L3Q5GJ75 292 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 FAM46CQ5VWP2 391 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 LINGO4Q6UY18 593 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 HDDC2Q7Z4H3 204 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 NT5DC3Q86UY8 548 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 SLC22A16Q86VW1 577 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 TMEM126BQ8IUX1 230 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 C1orf87Q8N0U7 546 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 SYS1Q8N2H4 156 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 ZCCHC9Q8N567 271 aaKnown RBP4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 C2orf73Q8N5S3 287 aaPredicted RBP4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 B3GNT7Q8NFL0 401 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 OR51D1Q8NGF3 324 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 OR4A16Q8NH70 328 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 OSR1Q8TAX0 266 aaPredicted RBP4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 CDS1Q92903 461 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 PPWD1Q96BP3 646 aaKnown RBP4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 RNF2Q99496 336 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 ATG101Q9BSB4 218 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 ABHD14AQ9BUJ0 271 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 ERVK-6Q9BXR3 956 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 ULBP1Q9BZM6 244 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 FN3KQ9H479 309 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 ACTR5Q9H9F9 607 aaPredicted RBP4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 FZD3Q9NPG1 666 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 PLEKHJ1Q9NW61 149 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 TREM2Q9NZC2 230 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 KCNG2Q9UJ96 466 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 OR52A1Q9UKL2 312 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 EMCNQ9ULC0 261 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 A4GNTQ9UNA3 340 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 YLPM1P49750 1951 aaKnown RBP4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 PPIAL4EA0A075B759 164 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 A0A1B0GVL5 298 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 PRSS37A4D1T9 235 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 SAGE2PA6NJ88 616 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 LOC110117498-PIK3R3F6TDL0 507 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 RRHO14718 337 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 XRCC2O43543 280 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 N4BP1O75113 896 aaKnown RBP4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 ENTPD5O75356 428 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 PSMG1O95456 288 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 SERPINA1P01009 418 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 IFNA4P05014 189 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 DCNP07585 359 aaKnown RBP4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 RAB40ALP0C0E4 278 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 PPIAL4FP0DN26 164 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 NCK1P16333 377 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 RBMS1P29558 406 aaKnown RBP4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 ERP29P30040 261 aaKnown RBP4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 SSTR2P30874 369 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 CALCRP30988 508 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 FMO4P31512 558 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 RCVRNP35243 200 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 PCK1P35558 622 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 CEACAM6P40199 344 aa4.86□□□□□ -1.63
TTC39DP-201ENST00000416781 IER3P46695 156 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms