RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 PON3Q15166 354 aa16.65■□□□□ 0.26
CHTOP-202ENST00000368687 GTF2IRD2BQ6EKJ0 949 aa16.65■□□□□ 0.26
CHTOP-202ENST00000368687 REEP3Q6NUK4 255 aa16.65■□□□□ 0.26
CHTOP-202ENST00000368687 OLIG3Q7RTU3 272 aa16.65■□□□□ 0.26
CHTOP-202ENST00000368687 GRINAQ7Z429 371 aa16.65■□□□□ 0.26
CHTOP-202ENST00000368687 GTF2IRD2Q86UP8 949 aa16.65■□□□□ 0.26
CHTOP-202ENST00000368687 MSRB3Q8IXL7 192 aa16.65■□□□□ 0.26
CHTOP-202ENST00000368687 ACBD4Q8NC06 268 aa16.65■□□□□ 0.26
CHTOP-202ENST00000368687 BHLHE22Q8NFJ8 381 aaPredicted RBP16.65■□□□□ 0.26
CHTOP-202ENST00000368687 OR10D3Q8NH80 312 aa16.65■□□□□ 0.26
CHTOP-202ENST00000368687 CPNE4Q96A23 557 aaPredicted RBP16.65■□□□□ 0.26
CHTOP-202ENST00000368687 ZG16BQ96DA0 208 aa16.65■□□□□ 0.26
CHTOP-202ENST00000368687 ANKRD27Q96NW4 1050 aa16.65■□□□□ 0.26
CHTOP-202ENST00000368687 CGREF1Q99674 301 aa16.65■□□□□ 0.26
CHTOP-202ENST00000368687 ENKD1Q9H0I2 346 aa16.65■□□□□ 0.26
CHTOP-202ENST00000368687 QRSL1Q9H0R6 528 aaKnown RBP16.65■□□□□ 0.26
CHTOP-202ENST00000368687 SAR1AQ9NR31 198 aa16.65■□□□□ 0.26
CHTOP-202ENST00000368687 GLRX2Q9NS18 164 aa16.65■□□□□ 0.26
CHTOP-202ENST00000368687 SLAMF8Q9P0V8 285 aa16.65■□□□□ 0.26
CHTOP-202ENST00000368687 CAPN7Q9Y6W3 813 aa16.65■□□□□ 0.26
CHTOP-202ENST00000368687 KIAA1549Q9HCM3 1950 aa16.64■□□□□ 0.25
CHTOP-202ENST00000368687 CDHR4A6H8M9 788 aa16.64■□□□□ 0.25
CHTOP-202ENST00000368687 NKX2-6A6NCS4 301 aa16.64■□□□□ 0.25
CHTOP-202ENST00000368687 CFAP73A6NFT4 308 aa16.64■□□□□ 0.25
CHTOP-202ENST00000368687 ARAFP10398 606 aa16.64■□□□□ 0.25
CHTOP-202ENST00000368687 SLC6A2P23975 617 aa16.64■□□□□ 0.25
CHTOP-202ENST00000368687 SLC7A1P30825 629 aa16.64■□□□□ 0.25
CHTOP-202ENST00000368687 RNF144AP50876 292 aaPredicted RBP16.64■□□□□ 0.25
CHTOP-202ENST00000368687 SESN3P58005 492 aa16.64■□□□□ 0.25
CHTOP-202ENST00000368687 RBBP4Q09028 425 aa16.64■□□□□ 0.25
CHTOP-202ENST00000368687 CYLC2Q14093 348 aaPredicted RBP16.64■□□□□ 0.25
CHTOP-202ENST00000368687 MAPK11Q15759 364 aa16.64■□□□□ 0.25
CHTOP-202ENST00000368687 CTU2Q2VPK5 515 aaKnown RBP16.64■□□□□ 0.25
CHTOP-202ENST00000368687 TRMT5Q32P41 509 aaKnown RBP16.64■□□□□ 0.25
CHTOP-202ENST00000368687 MMEL1Q495T6 779 aa16.64■□□□□ 0.25
CHTOP-202ENST00000368687 RUNDC3AQ59EK9 446 aa16.64■□□□□ 0.25
CHTOP-202ENST00000368687 MRPL2Q5T653 305 aaKnown RBP16.64■□□□□ 0.25
CHTOP-202ENST00000368687 HBMQ6B0K9 141 aa16.64■□□□□ 0.25
CHTOP-202ENST00000368687 ZNF550Q7Z398 422 aa16.64■□□□□ 0.25
CHTOP-202ENST00000368687 SLC30A8Q8IWU4 369 aa16.64■□□□□ 0.25
CHTOP-202ENST00000368687 PCYOX1LQ8NBM8 494 aa16.64■□□□□ 0.25
CHTOP-202ENST00000368687 C10orf82Q8WW14 230 aa16.64■□□□□ 0.25
CHTOP-202ENST00000368687 MARVELD3Q96A59 401 aa16.64■□□□□ 0.25
CHTOP-202ENST00000368687 REXO5Q96IC2 774 aaKnown RBP16.64■□□□□ 0.25
CHTOP-202ENST00000368687 ADGRG7Q96K78 797 aa16.64■□□□□ 0.25
CHTOP-202ENST00000368687 CPPED1Q9BRF8 314 aaPredicted RBP16.64■□□□□ 0.25
CHTOP-202ENST00000368687 SPATA9Q9BWV2 254 aa16.64■□□□□ 0.25
CHTOP-202ENST00000368687 PRRG4Q9BZD6 226 aa16.64■□□□□ 0.25
CHTOP-202ENST00000368687 UCK2Q9BZX2 261 aa16.64■□□□□ 0.25
CHTOP-202ENST00000368687 RNF122Q9H9V4 155 aa16.64■□□□□ 0.25
CHTOP-202ENST00000368687 DNAJB12Q9NXW2 375 aaKnown RBP16.64■□□□□ 0.25
CHTOP-202ENST00000368687 ZNF443Q9Y2A4 671 aaPredicted RBP16.64■□□□□ 0.25
CHTOP-202ENST00000368687 ANKHD1Q8IWZ3 2542 aaKnown RBP16.64■□□□□ 0.25
CHTOP-202ENST00000368687 KDM4EB2RXH2 506 aaPredicted RBP16.63■□□□□ 0.25
CHTOP-202ENST00000368687 PGM3O95394 542 aa16.63■□□□□ 0.25
CHTOP-202ENST00000368687 TGM6O95932 706 aa16.63■□□□□ 0.25
CHTOP-202ENST00000368687 IGFBP2P18065 325 aa16.63■□□□□ 0.25
CHTOP-202ENST00000368687 CLK1P49759 484 aaKnown RBP16.63■□□□□ 0.25
CHTOP-202ENST00000368687 CARD18P57730 90 aa16.63■□□□□ 0.25
CHTOP-202ENST00000368687 CDK6Q00534 326 aa16.63■□□□□ 0.25
CHTOP-202ENST00000368687 MERTKQ12866 999 aa16.63■□□□□ 0.25
CHTOP-202ENST00000368687 KLF10Q13118 480 aa16.63■□□□□ 0.25
CHTOP-202ENST00000368687 TOMM34Q15785 309 aaPredicted RBP16.63■□□□□ 0.25
CHTOP-202ENST00000368687 KIF18BQ86Y91 864 aa16.63■□□□□ 0.25
CHTOP-202ENST00000368687 LIX1LQ8IVB5 337 aa16.63■□□□□ 0.25
CHTOP-202ENST00000368687 RELL2Q8NC24 303 aaPredicted RBP16.63■□□□□ 0.25
CHTOP-202ENST00000368687 C11orf65Q8NCR3 313 aa16.63■□□□□ 0.25
CHTOP-202ENST00000368687 FNDC9Q8TBE3 224 aa16.63■□□□□ 0.25
CHTOP-202ENST00000368687 INTS12Q96CB8 462 aaKnown RBP16.63■□□□□ 0.25
CHTOP-202ENST00000368687 ZNF607Q96SK3 696 aa16.63■□□□□ 0.25
CHTOP-202ENST00000368687 TMEM185BQ9H7F4 350 aa16.63■□□□□ 0.25
CHTOP-202ENST00000368687 EVA1AQ9H8M9 152 aa16.63■□□□□ 0.25
CHTOP-202ENST00000368687 PACSIN3Q9UKS6 424 aa16.63■□□□□ 0.25
CHTOP-202ENST00000368687 ANGPT4Q9Y264 503 aa16.63■□□□□ 0.25
CHTOP-202ENST00000368687 PRORSD1PA6NEY8 169 aa16.62■□□□□ 0.25
CHTOP-202ENST00000368687 H0YC42 278 aa16.62■□□□□ 0.25
CHTOP-202ENST00000368687 SYT5O00445 386 aa16.62■□□□□ 0.25
CHTOP-202ENST00000368687 TNFSF11O14788 317 aa16.62■□□□□ 0.25
CHTOP-202ENST00000368687 SERPINB7O75635 380 aa16.62■□□□□ 0.25
CHTOP-202ENST00000368687 PRKAR1BP31321 381 aa16.62■□□□□ 0.25
CHTOP-202ENST00000368687 RYKP34925 604 aa16.62■□□□□ 0.25
CHTOP-202ENST00000368687 SFTPDP35247 375 aa16.62■□□□□ 0.25
CHTOP-202ENST00000368687 TPD52P55327 224 aaPredicted RBP16.62■□□□□ 0.25
CHTOP-202ENST00000368687 COPZ1P61923 177 aa16.62■□□□□ 0.25
CHTOP-202ENST00000368687 CYP51A1Q16850 503 aa16.62■□□□□ 0.25
CHTOP-202ENST00000368687 ZNF311Q5JNZ3 666 aa16.62■□□□□ 0.25
CHTOP-202ENST00000368687 POMZP3Q6PJE2 187 aa16.62■□□□□ 0.25
CHTOP-202ENST00000368687 PLEKHM3Q6ZWE6 761 aa16.62■□□□□ 0.25
CHTOP-202ENST00000368687 SPATA21Q7Z572 469 aa16.62■□□□□ 0.25
CHTOP-202ENST00000368687 SERPINA11Q86U17 422 aa16.62■□□□□ 0.25
CHTOP-202ENST00000368687 RETREG3Q86VR2 466 aa16.62■□□□□ 0.25
CHTOP-202ENST00000368687 HIPK4Q8NE63 616 aa16.62■□□□□ 0.25
CHTOP-202ENST00000368687 CNOT9Q92600 299 aaKnown RBP16.62■□□□□ 0.25
CHTOP-202ENST00000368687 RNASE6Q93091 150 aaKnown RBP16.62■□□□□ 0.25
CHTOP-202ENST00000368687 MAL2Q969L2 176 aa16.62■□□□□ 0.25
CHTOP-202ENST00000368687 GMPPAQ96IJ6 420 aaPredicted RBP16.62■□□□□ 0.25
CHTOP-202ENST00000368687 KLHDC3Q9BQ90 382 aa16.62■□□□□ 0.25
CHTOP-202ENST00000368687 GP6Q9HCN6 339 aa16.62■□□□□ 0.25
CHTOP-202ENST00000368687 GID8Q9NWU2 228 aa16.62■□□□□ 0.25
CHTOP-202ENST00000368687 JKAMPQ9P055 326 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 89.2 ms