RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 CLUP10909 449 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 PEPDP12955 493 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 ZNF19P17023 458 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 RAB3BP20337 219 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 STOMP27105 288 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 TLX1P31314 330 aaPredicted RBP8.04□□□□□ -1.12
CLK1-201ENST00000321356 SOX9P48436 509 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 RAG2P55895 527 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 OR12D2P58182 307 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 RPS7P62081 194 aaKnown RBP8.04□□□□□ -1.12
CLK1-201ENST00000321356 POU4F2Q12837 409 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 DEFB134Q4QY38 66 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 HSD17B12Q53GQ0 312 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 FAM209AQ5JX71 171 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 ZBTB37Q5TC79 503 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 FAAH2Q6GMR7 532 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 TANGO2Q6ICL3 276 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 ZCCHC12Q6PEW1 402 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 RPTNQ6XPR3 784 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 SSX6Q7RTT6 188 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 CDK20Q8IZL9 346 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 SLC43A2Q8N370 569 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 LRRC17Q8N6Y2 441 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 DTX3Q8N9I9 347 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 OR5H6Q8NGV6 325 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 OR5J2Q8NH18 312 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 SMPDL3BQ92485 455 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 GHSRQ92847 366 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 HGDQ93099 445 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 PEX11GQ96HA9 241 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 MED30Q96HR3 178 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 DCBLD2Q96PD2 775 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 OR2M4Q96R27 311 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 ZNF559Q9BR84 538 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 OR51V1Q9H2C8 321 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 EVA1AQ9H8M9 152 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 C14orf105Q9NVL8 296 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 ABRACLQ9P1F3 81 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 COPZ2Q9P299 210 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 MOSPD1Q9UJG1 213 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 FBXL4Q9UKA2 621 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 FBXL21Q9UKT6 434 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 ELF5Q9UKW6 265 aaPredicted RBP8.04□□□□□ -1.12
CLK1-201ENST00000321356 RWDD3Q9Y3V2 267 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 TRAV6A0A075B6T7 132 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 TRAV27A0A087WT01 109 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 NPIPA5A0A0B4J1W7 369 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 A0A0B4J2E0 115 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 A0A1B0GX12 115 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 PRSS38A1L453 326 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 ANKRD61A6NGH8 418 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 NPIPA7E9PJI5 369 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 SCAMP1O15126 338 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 GSTZ1O43708 216 aaPredicted RBP8.04□□□□□ -1.12
CLK1-201ENST00000321356 BRINP1O60477 761 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 PPP1R3DO95685 299 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 NPIPA8P0DM63 369 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 SAGP10523 405 aaPredicted RBP8.04□□□□□ -1.12
CLK1-201ENST00000321356 EPXP11678 715 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 ZNF3P17036 446 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 ATF1P18846 271 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 DRD5P21918 477 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 NUDT1P36639 197 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 ACVR1BP36896 505 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 SRP9P49458 86 aaKnown RBP8.04□□□□□ -1.12
CLK1-201ENST00000321356 ARPC4P59998 168 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 MGAT2Q10469 447 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 KIR2DS3Q14952 304 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 CEP78Q5JTW2 689 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 ZNF776Q68DI1 518 aaPredicted RBP8.04□□□□□ -1.12
CLK1-201ENST00000321356 FCRLBQ6BAA4 426 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 FCRL6Q6DN72 434 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 PSRC1Q6PGN9 363 aaPredicted RBP8.04□□□□□ -1.12
CLK1-201ENST00000321356 LYPD4Q6UWN0 246 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 KRT74Q7RTS7 529 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 CMIPQ8IY22 773 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 ZNF655Q8N720 491 aaPredicted RBP8.04□□□□□ -1.12
CLK1-201ENST00000321356 COX18Q8N8Q8 333 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 OR4C6Q8NH72 309 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 ZCCHC10Q8TBK6 192 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 ADAMTS14Q8WXS8 1223 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 HOXB13Q92826 284 aaPredicted RBP8.04□□□□□ -1.12
CLK1-201ENST00000321356 SLC22A18Q96BI1 424 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 C7orf50Q9BRJ6 194 aaKnown RBP8.04□□□□□ -1.12
CLK1-201ENST00000321356 MKRN2Q9H000 416 aaKnown RBP8.04□□□□□ -1.12
CLK1-201ENST00000321356 OR51J1Q9H342 316 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 RANBP3Q9H6Z4 567 aaPredicted RBP8.04□□□□□ -1.12
CLK1-201ENST00000321356 IL21RQ9HBE5 538 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 MCCC2Q9HCC0 563 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 LYRM4Q9HD34 91 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 ADAP2Q9NPF8 381 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 POLE3Q9NRF9 147 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 ZNF275Q9NSD4 429 aaPredicted RBP8.04□□□□□ -1.12
CLK1-201ENST00000321356 STMN3Q9NZ72 180 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 GDE1Q9NZC3 331 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 ZNF624Q9P2J8 865 aaPredicted RBP8.04□□□□□ -1.12
CLK1-201ENST00000321356 SERTAD3Q9UJW9 196 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 PILRAQ9UKJ1 303 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 PCOLCE2Q9UKZ9 415 aa8.04□□□□□ -1.12
CLK1-201ENST00000321356 ICAM5Q9UMF0 924 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms