RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 PTRH2Q9Y3E5 179 aaKnown RBP20.78■□□□□ 0.92
CDX1-201ENST00000231656 RPL36Q9Y3U8 105 aaKnown RBP20.78■□□□□ 0.92
CDX1-201ENST00000231656 DBTP11182 482 aaKnown RBP20.77■□□□□ 0.92
CDX1-201ENST00000231656 CD36P16671 472 aa20.77■□□□□ 0.92
CDX1-201ENST00000231656 ACAA2P42765 397 aaKnown RBP20.77■□□□□ 0.92
CDX1-201ENST00000231656 SNAPC1Q16533 368 aa20.77■□□□□ 0.92
CDX1-201ENST00000231656 ZNF620Q6ZNG0 422 aa20.77■□□□□ 0.92
CDX1-201ENST00000231656 CLDN22Q8N7P3 220 aa20.77■□□□□ 0.92
CDX1-201ENST00000231656 ZNF614Q8N883 585 aa20.77■□□□□ 0.92
CDX1-201ENST00000231656 OR4Q3Q8NH05 313 aa20.77■□□□□ 0.92
CDX1-201ENST00000231656 TMEM239Q8WW34 195 aa20.77■□□□□ 0.92
CDX1-201ENST00000231656 SLC35B4Q969S0 331 aa20.77■□□□□ 0.92
CDX1-201ENST00000231656 ART5Q96L15 291 aa20.77■□□□□ 0.92
CDX1-201ENST00000231656 TSSK6Q9BXA6 273 aa20.77■□□□□ 0.92
CDX1-201ENST00000231656 B3GNT4Q9C0J1 378 aa20.77■□□□□ 0.92
CDX1-201ENST00000231656 KRCC1Q9NPI7 259 aaPredicted RBP20.77■□□□□ 0.92
CDX1-201ENST00000231656 DLL3Q9NYJ7 618 aa20.77■□□□□ 0.92
CDX1-201ENST00000231656 CDC42EP2O14613 210 aa20.77■□□□□ 0.91
CDX1-201ENST00000231656 SLC22A1O15245 554 aa20.77■□□□□ 0.91
CDX1-201ENST00000231656 ADAM11O75078 769 aa20.77■□□□□ 0.91
CDX1-201ENST00000231656 UMODP07911 640 aa20.77■□□□□ 0.91
CDX1-201ENST00000231656 ATP12AP54707 1039 aa20.77■□□□□ 0.91
CDX1-201ENST00000231656 PSMD4P55036 377 aaKnown RBP20.77■□□□□ 0.91
CDX1-201ENST00000231656 CPEB4Q17RY0 729 aaKnown RBP eCLIP20.77■□□□□ 0.91
CDX1-201ENST00000231656 ZSWIM7Q19AV6 140 aa20.77■□□□□ 0.91
CDX1-201ENST00000231656 LSRQ86X29 649 aaPredicted RBP20.77■□□□□ 0.91
CDX1-201ENST00000231656 OR2Y1Q8NGV0 311 aa20.77■□□□□ 0.91
CDX1-201ENST00000231656 TBC1D15Q8TC07 691 aa20.77■□□□□ 0.91
CDX1-201ENST00000231656 TMEM163Q8TC26 289 aa20.77■□□□□ 0.91
CDX1-201ENST00000231656 ARSGQ96EG1 525 aa20.77■□□□□ 0.91
CDX1-201ENST00000231656 ZNF582Q96NG8 517 aaPredicted RBP20.77■□□□□ 0.91
CDX1-201ENST00000231656 FLRT3Q9NZU0 649 aa20.77■□□□□ 0.91
CDX1-201ENST00000231656 OR10H1Q9Y4A9 318 aa20.77■□□□□ 0.91
CDX1-201ENST00000231656 CDH10Q9Y6N8 788 aa20.77■□□□□ 0.91
CDX1-201ENST00000231656 TCN2P20062 427 aa20.76■□□□□ 0.91
CDX1-201ENST00000231656 PTNP21246 168 aa20.76■□□□□ 0.91
CDX1-201ENST00000231656 GABREP78334 506 aa20.76■□□□□ 0.91
CDX1-201ENST00000231656 PRKCDQ05655 676 aa20.76■□□□□ 0.91
CDX1-201ENST00000231656 ZNF367Q7RTV3 350 aa20.76■□□□□ 0.91
CDX1-201ENST00000231656 CPEB2Q7Z5Q1 589 aaKnown RBP20.76■□□□□ 0.91
CDX1-201ENST00000231656 ESX1Q8N693 406 aa20.76■□□□□ 0.91
CDX1-201ENST00000231656 OR1N1Q8NGS0 311 aa20.76■□□□□ 0.91
CDX1-201ENST00000231656 CT55Q8WUE5 264 aa20.76■□□□□ 0.91
CDX1-201ENST00000231656 LRR1Q96L50 414 aa20.76■□□□□ 0.91
CDX1-201ENST00000231656 SLC46A1Q96NT5 459 aa20.76■□□□□ 0.91
CDX1-201ENST00000231656 NUDT9Q9BW91 350 aa20.76■□□□□ 0.91
CDX1-201ENST00000231656 TMEM27Q9HBJ8 222 aa20.76■□□□□ 0.91
CDX1-201ENST00000231656 TBC1D23Q9NUY8 699 aa20.76■□□□□ 0.91
CDX1-201ENST00000231656 C19orf25Q9UFG5 118 aaPredicted RBP20.76■□□□□ 0.91
CDX1-201ENST00000231656 A0A0B4J2E0 115 aa20.75■□□□□ 0.91
CDX1-201ENST00000231656 A0A1B0GX12 115 aa20.75■□□□□ 0.91
CDX1-201ENST00000231656 CD63P08962 238 aa20.75■□□□□ 0.91
CDX1-201ENST00000231656 GPR143P51810 404 aa20.75■□□□□ 0.91
CDX1-201ENST00000231656 CLEC12AQ5QGZ9 265 aa20.75■□□□□ 0.91
CDX1-201ENST00000231656 TMPRSS7Q7RTY8 843 aa20.75■□□□□ 0.91
CDX1-201ENST00000231656 SLC46A3Q7Z3Q1 461 aa20.75■□□□□ 0.91
CDX1-201ENST00000231656 PFN4Q8NHR9 129 aa20.75■□□□□ 0.91
CDX1-201ENST00000231656 C8orf44Q96CB5 159 aa20.75■□□□□ 0.91
CDX1-201ENST00000231656 TMEM80Q96HE8 168 aa20.75■□□□□ 0.91
CDX1-201ENST00000231656 SLC38A2Q96QD8 506 aa20.75■□□□□ 0.91
CDX1-201ENST00000231656 WDR77Q9BQA1 342 aaPredicted RBP20.75■□□□□ 0.91
CDX1-201ENST00000231656 COPS7AQ9UBW8 275 aa20.75■□□□□ 0.91
CDX1-201ENST00000231656 SAGE2PA6NJ88 616 aa20.74■□□□□ 0.91
CDX1-201ENST00000231656 RAB40ALP0C0E4 278 aa20.74■□□□□ 0.91
CDX1-201ENST00000231656 MAKP20794 623 aa20.74■□□□□ 0.91
CDX1-201ENST00000231656 CMIPQ8IY22 773 aa20.74■□□□□ 0.91
CDX1-201ENST00000231656 TRIM2Q9C040 744 aa20.74■□□□□ 0.91
CDX1-201ENST00000231656 C20orf141Q9NUB4 165 aa20.74■□□□□ 0.91
CDX1-201ENST00000231656 CFL2Q9Y281 166 aa20.74■□□□□ 0.91
CDX1-201ENST00000231656 A0A1B0GWA3 101 aa20.74■□□□□ 0.91
CDX1-201ENST00000231656 UNC119BA6NIH7 251 aa20.74■□□□□ 0.91
CDX1-201ENST00000231656 CHP2O43745 196 aa20.74■□□□□ 0.91
CDX1-201ENST00000231656 FOLR3P41439 243 aa20.74■□□□□ 0.91
CDX1-201ENST00000231656 RNLSQ5VYX0 342 aa20.74■□□□□ 0.91
CDX1-201ENST00000231656 SLC30A6Q6NXT4 461 aa20.74■□□□□ 0.91
CDX1-201ENST00000231656 PAPD4Q6PIY7 484 aaKnown RBP20.74■□□□□ 0.91
CDX1-201ENST00000231656 AMER2Q8N7J2 671 aa20.74■□□□□ 0.91
CDX1-201ENST00000231656 LSMEM1Q8N8F7 131 aa20.74■□□□□ 0.91
CDX1-201ENST00000231656 NFAM1Q8NET5 270 aaPredicted RBP20.74■□□□□ 0.91
CDX1-201ENST00000231656 NLGN4YQ8NFZ3 816 aaPredicted RBP20.74■□□□□ 0.91
CDX1-201ENST00000231656 NDNFQ8TB73 568 aa20.74■□□□□ 0.91
CDX1-201ENST00000231656 RPL3LQ92901 407 aaKnown RBP20.74■□□□□ 0.91
CDX1-201ENST00000231656 OR5M11Q96RB7 305 aa20.74■□□□□ 0.91
CDX1-201ENST00000231656 PRRG3Q9BZD7 231 aa20.74■□□□□ 0.91
CDX1-201ENST00000231656 DCHS1Q96JQ0 3298 aa20.74■□□□□ 0.91
CDX1-201ENST00000231656 KDM4EB2RXH2 506 aaPredicted RBP20.73■□□□□ 0.91
CDX1-201ENST00000231656 IFI30P13284 250 aa20.73■□□□□ 0.91
CDX1-201ENST00000231656 PPICP45877 212 aa20.73■□□□□ 0.91
CDX1-201ENST00000231656 CTBP2P56545 445 aa20.73■□□□□ 0.91
CDX1-201ENST00000231656 VBP1P61758 197 aa20.73■□□□□ 0.91
CDX1-201ENST00000231656 LSM3P62310 102 aaKnown RBP20.73■□□□□ 0.91
CDX1-201ENST00000231656 DOC2BQ14184 412 aa20.73■□□□□ 0.91
CDX1-201ENST00000231656 PGGHGQ32M88 737 aa20.73■□□□□ 0.91
CDX1-201ENST00000231656 ZNF550Q7Z398 422 aa20.73■□□□□ 0.91
CDX1-201ENST00000231656 OR4C3Q8NH37 302 aa20.73■□□□□ 0.91
CDX1-201ENST00000231656 BRIX1Q8TDN6 353 aaKnown RBP20.73■□□□□ 0.91
CDX1-201ENST00000231656 GRHL3Q8TE85 626 aa20.73■□□□□ 0.91
CDX1-201ENST00000231656 LMF1Q96S06 567 aa20.73■□□□□ 0.91
CDX1-201ENST00000231656 LPAR4Q99677 370 aa20.73■□□□□ 0.91
CDX1-201ENST00000231656 DPH1Q9BZG8 443 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms