RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 WIF1Q9Y5W5 379 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 A0A1W2PQL4 384 aaPredicted RBP12.4□□□□□ -0.42
COL1A1-201ENST00000225964 PRAMEF27A3QJZ7 478 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 ZNF736B4DX44 427 aaPredicted RBP12.4□□□□□ -0.42
COL1A1-201ENST00000225964 EN2P19622 333 aaPredicted RBP12.4□□□□□ -0.42
COL1A1-201ENST00000225964 RPS18P62269 152 aaKnown RBP12.4□□□□□ -0.42
COL1A1-201ENST00000225964 PRAMEF9Q5VWM5 478 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 ITFG2Q969R8 447 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 ZBTB32Q9Y2Y4 487 aaPredicted RBP12.4□□□□□ -0.42
COL1A1-201ENST00000225964 NUP188Q5SRE5 1749 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 NWD2Q9ULI1 1742 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 TOR1AO14656 332 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 CAPNS1P04632 268 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 WNT4P56705 351 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 SPOCK1Q08629 439 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 RPE65Q16518 533 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 AARDQ4LEZ3 155 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 RAB41Q5JT25 222 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 ZNF585AQ6P3V2 769 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 OR14A16Q8NHC5 309 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 CHFRQ96EP1 664 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 TM7SF3Q9NS93 570 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 GK2Q14410 553 aaPredicted RBP12.4□□□□□ -0.42
COL1A1-201ENST00000225964 KHDC1LQ5JSQ8 128 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 C9orf152Q5JTZ5 239 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 ZNF679Q8IYX0 411 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 SLC23A2Q9UGH3 650 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 EBF1Q9UH73 591 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 TRAPPC2LQ9UL33 140 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 SLC22A5O76082 557 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 SPDEFO95238 335 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 C1SP09871 688 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 GAAP10253 952 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 PDZD9Q8IXQ8 264 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 DNAJC22Q8N4W6 341 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 CNTNAP3BQ96NU0 1288 aa12.4□□□□□ -0.42
COL1A1-201ENST00000225964 GMDSO60547 372 aa12.4□□□□□ -0.43
COL1A1-201ENST00000225964 SRPX2O60687 465 aaPredicted RBP12.4□□□□□ -0.43
COL1A1-201ENST00000225964 HMGN2P05204 90 aaKnown RBP12.4□□□□□ -0.43
COL1A1-201ENST00000225964 TCEAL1Q15170 157 aa12.4□□□□□ -0.43
COL1A1-201ENST00000225964 TMEM176BQ3YBM2 270 aaPredicted RBP12.4□□□□□ -0.43
COL1A1-201ENST00000225964 ZNF684Q5T5D7 378 aa12.4□□□□□ -0.43
COL1A1-201ENST00000225964 CBARPQ8N350 705 aaPredicted RBP12.4□□□□□ -0.43
COL1A1-201ENST00000225964 ZADH2Q8N4Q0 377 aa12.4□□□□□ -0.43
COL1A1-201ENST00000225964 ASCC1Q8N9N2 400 aaKnown RBP12.4□□□□□ -0.43
COL1A1-201ENST00000225964 EDAQ92838 391 aa12.4□□□□□ -0.43
COL1A1-201ENST00000225964 SMIM3Q9BZL3 60 aa12.4□□□□□ -0.43
COL1A1-201ENST00000225964 UNKLQ9H9P5 680 aaKnown RBP12.4□□□□□ -0.43
COL1A1-201ENST00000225964 RDH14Q9HBH5 336 aa12.4□□□□□ -0.43
COL1A1-201ENST00000225964 UBQLN4Q9NRR5 601 aa12.4□□□□□ -0.43
COL1A1-201ENST00000225964 NLKQ9UBE8 527 aa12.4□□□□□ -0.43
COL1A1-201ENST00000225964 A0A1W2PPV4 95 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 FOXD2O60548 495 aaPredicted RBP12.39□□□□□ -0.43
COL1A1-201ENST00000225964 HEXAP06865 529 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 C7P10643 843 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 RAB5BP61020 215 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 NCS1P62166 190 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 ZNF789Q5FWF6 425 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 LDLRAD1Q5T700 205 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 S100A7AQ86SG5 101 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 VRK1Q99986 396 aaPredicted RBP12.39□□□□□ -0.43
COL1A1-201ENST00000225964 ZNF576Q9H609 170 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 HRASLSQ9HDD0 168 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 C17orf113A0A1B0GUU1 675 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 ZNF254O75437 659 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 APOC3P02656 99 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 CSF1P09603 554 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 RPS2P15880 293 aaKnown RBP12.39□□□□□ -0.43
COL1A1-201ENST00000225964 CTSCP53634 463 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 TMEM244Q5VVB8 128 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 NDUFAF7Q7L592 441 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 COMMD7Q86VX2 200 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 SULF2Q8IWU5 870 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 FNDC9Q8TBE3 224 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 FOLH1BQ9HBA9 442 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 ZNF225Q9UK10 706 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 RFXAPO00287 272 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 GJB3O75712 270 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 CPMP14384 443 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 MLF2Q15773 248 aaPredicted RBP12.39□□□□□ -0.43
COL1A1-201ENST00000225964 LCN10Q6JVE6 187 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 ADIPOR2Q86V24 386 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 FAM160A2Q8N612 972 aaPredicted RBP12.39□□□□□ -0.43
COL1A1-201ENST00000225964 PNPLA1Q8N8W4 532 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 PRRC1Q96M27 445 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 CCDC32Q9BV29 185 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 FUNDC2Q9BWH2 189 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 C12orf49Q9H741 205 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 DDX31Q9H8H2 851 aaKnown RBP12.39□□□□□ -0.43
COL1A1-201ENST00000225964 TMEM45AQ9NWC5 275 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 DNAJB5O75953 348 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 FOXA1P55317 472 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 CYCSP99999 105 aaKnown RBP12.39□□□□□ -0.43
COL1A1-201ENST00000225964 GPR18Q14330 331 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 LCN8Q6JVE9 175 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 HEPHL1Q6MZM0 1159 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 FAM198BQ6UWH4 519 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 TSPYL5Q86VY4 417 aaPredicted RBP12.39□□□□□ -0.43
COL1A1-201ENST00000225964 ACBD4Q8NC06 268 aa12.39□□□□□ -0.43
COL1A1-201ENST00000225964 PITHD1Q9GZP4 211 aaPredicted RBP12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 805 ms