RNA–Protein interactions for RNA: ENSMUST00000193839.5

Pcdha1-202, Transcript of Protocadherin alpha 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Pcdha1, Length 4,925 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1-202ENSMUST00000193839 Cacng2O88602 323 aa13□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 GzmcP08882 248 aa13□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 PthlhP22858 175 aa13□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 GalP47212 124 aa13□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Cxcr4P70658 359 aa13□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Spata6Q3U6K5 488 aa13□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 ToxQ66JW3 526 aa13□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Tra2aQ6PFR5 281 aaKnown RBP13□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Mrgprb3Q91ZC1 312 aa13□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Timm22Q9CQ85 194 aa13□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Q9D5Y0 588 aa13□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Yipf7Q9JIM5 254 aa13□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Avpr1bQ9WU02 421 aa13□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 RbpmsQ9WVB0 197 aaKnown RBP13□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Cd320Q9Z1P5 260 aa13□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Igkv12-98A0A0G2JGF9 115 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Olfr1025-ps1A0A140T8K3 312 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Btbd35f21A0A140T8Q5 498 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Gm31371A0A1D5RM70 265 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Btbd35f22J3QN64 498 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Tcn2O88968 430 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Tcf3P15806 651 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Kcne1P23299 129 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Commd6Q3V4B5 87 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Tbccd1Q640P7 552 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 ManealQ6P1J0 452 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Sertm1Q8CD78 107 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 GnalQ8CGK7 381 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Lgi4Q8K1S1 537 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Zmynd11Q8R5C8 602 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Abhd4Q8VD66 342 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Eif2b1Q99LC8 305 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Rab3bQ9CZT8 219 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 1700069L16RikQ9D9H5 109 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Entpd4Q9DBT4 613 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Plscr2Q9DCW2 307 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Yipf5Q9EQQ2 257 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Cts6Q9ET52 334 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Dclre1aQ9JIC3 1026 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Mrpl39Q9JKF7 336 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Olfr1432A0A140LHS7 346 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Btbd35f28A2CFD5 498 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Gm1330D3Z460 184 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Vmn2r96E9PZU5 664 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Gm8020F6WLE9 229 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Gm3327F7C9A1 213 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Btbd35f30J3QML3 498 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Bdkrb2P32299 392 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Foxk1P42128 719 aaKnown RBP12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Tas2r123P59528 333 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Gm11492Q5ND19 536 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Tmem151aQ6GQT5 468 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Olfr1275Q7TQY8 312 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Slc27a4Q91VE0 643 aaKnown RBP12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 SharpinQ91WA6 380 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Slco2a1Q9EPT5 643 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Alyref2Q9JJW6 218 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Cdh20Q9Z0M3 801 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Xpnpep2B1AVD1 674 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Slc16a5G5E8K6 468 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Pot1bH7BX60 640 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Matn3O35701 481 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Cds1P98191 461 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 WdcpQ6NV72 663 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Mrpl22Q8BU88 206 aaKnown RBP12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Unc119bQ8C4B4 251 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Zfpm2Q8CCH7 1151 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Rasgef1bQ8JZL7 473 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Vmn1r234Q8R298 329 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Olfr77Q8VEY9 312 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Olfr1093Q8VF14 322 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Gje1Q9CX92 205 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 NaaaQ9D7V9 362 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Dbf4Q9QZ41 663 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Tmem201A2A8U2 664 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Mrap2D3Z1Q2 207 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Gm21103E9Q2Q1 267 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Ikzf1Q03267 517 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Nox3Q672J9 568 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Plcz1Q8K4D7 647 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Rnf167Q91XF4 347 aa12.99□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Myo7aP97479 2215 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Olfr396-ps1A0A0U1RNF5 211 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 A0A1L1STL9 112 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Gm13178B1AVU7 408 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Gm11027G8JL69 66 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Vmn2r92L7N2A4 860 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Alx3O70137 343 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Etv2P41163 335 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Klhl8P59280 629 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Ptpn18Q61152 453 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 GcgrQ61606 485 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 NnatQ61979 81 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 D2hgdhQ8CIM3 535 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Ly6g5cQ8K1T5 149 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Cnot9Q9JKY0 299 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 ClnkQ9QZE2 435 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Scgb1b30A2BH64 92 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Tmed7D3YZZ5 224 aa12.98□□□□□ -0.33
Pcdha1-202ENSMUST00000193839 Btbd2E9PUS2 523 aa12.98□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 43.7 ms