RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 RPS4Y1P22090 263 aaKnown RBP3.16□□□□□ -1.9
LIG4-205ENST00000614526 HCCSP53701 268 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 EMP2P54851 167 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 FXYD6P3P58550 94 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 IGLV3-21P80748 117 aaPredicted RBP3.16□□□□□ -1.9
LIG4-205ENST00000614526 CDK5Q00535 292 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 ACY1Q03154 408 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 PLCXD2Q0VAA5 305 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 COX10Q12887 443 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 ELAVL1Q15717 326 aaKnown RBP3.16□□□□□ -1.9
LIG4-205ENST00000614526 C1QL3Q5VWW1 255 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 C12orf73Q69YU5 71 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 PRSS42Q7Z5A4 293 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 SNX29P2Q8IUI4 249 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 CDK20Q8IZL9 346 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 SVOPQ8N4V2 548 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 OR51G2Q8NGK0 314 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 OR9Q1Q8NGQ5 310 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 FANK1Q8TC84 345 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 IPCEF1Q8WWN9 437 aaPredicted RBP3.16□□□□□ -1.9
LIG4-205ENST00000614526 METTL21AQ8WXB1 218 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 GATAD2BQ8WXI9 593 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 DAZLQ92904 295 aaKnown RBP3.16□□□□□ -1.9
LIG4-205ENST00000614526 MR1Q95460 341 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 LCORQ96JN0 433 aaPredicted RBP3.16□□□□□ -1.9
LIG4-205ENST00000614526 ZNF582Q96NG8 517 aaPredicted RBP3.16□□□□□ -1.9
LIG4-205ENST00000614526 CRB3Q9BUF7 120 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 G6PC3Q9BUM1 346 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 UBQLN3Q9H347 655 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 TPK1Q9H3S4 243 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 FN3KQ9H479 309 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 OCEL1Q9H607 264 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 GALNT9Q9HCQ5 603 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 KLHL1Q9NR64 748 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 ST6GALNAC1Q9NSC7 600 aaPredicted RBP3.16□□□□□ -1.9
LIG4-205ENST00000614526 TOR4AQ9NXH8 423 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 COPS7AQ9UBW8 275 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 ENOPH1Q9UHY7 261 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 YARS2Q9Y2Z4 477 aaKnown RBP3.16□□□□□ -1.9
LIG4-205ENST00000614526 ADAM18Q9Y3Q7 739 aa3.16□□□□□ -1.9
LIG4-205ENST00000614526 DMXL1Q9Y485 3027 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 IGKV3D-11A0A0A0MRZ8 115 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 SLC35F4A4IF30 521 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 ARRDC5A6NEK1 342 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 EFCAB9A8MZ26 197 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 SHISA8B8ZZ34 492 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 E9PQ18 207 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 NDUFB5O43674 189 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 AK1P00568 194 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 SP9P0CG40 484 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 GSTM3P21266 225 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 RPL4P36578 427 aaKnown RBP3.15□□□□□ -1.9
LIG4-205ENST00000614526 ETV5P41161 510 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 MAGEA8P43361 318 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 PPICP45877 212 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 ETV1P50549 477 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 CDH11P55287 796 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 FBXW4P57775 412 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 RPS18P62269 152 aaKnown RBP3.15□□□□□ -1.9
LIG4-205ENST00000614526 DCDP81605 110 aaKnown RBP3.15□□□□□ -1.9
LIG4-205ENST00000614526 FGFBP1Q14512 234 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 EBPQ15125 230 aaKnown RBP3.15□□□□□ -1.9
LIG4-205ENST00000614526 INPP5JQ15735 1006 aaPredicted RBP3.15□□□□□ -1.9
LIG4-205ENST00000614526 CTF1Q16619 201 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 ZNF791Q3KP31 576 aaPredicted RBP3.15□□□□□ -1.9
LIG4-205ENST00000614526 ANKDD1AQ495B1 522 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 EXOSC6Q5RKV6 272 aaKnown RBP3.15□□□□□ -1.9
LIG4-205ENST00000614526 LIPKQ5VXJ0 399 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 PLAG1Q6DJT9 500 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 RHBDD2Q6NTF9 364 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 PAPD4Q6PIY7 484 aaKnown RBP3.15□□□□□ -1.9
LIG4-205ENST00000614526 ZNF620Q6ZNG0 422 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 QSOX2Q6ZRP7 698 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 RASSF6Q6ZTQ3 369 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 SLC29A4Q7RTT9 530 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 BMP8AQ7Z5Y6 402 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 MARCH9Q86YJ5 346 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 OR4D9Q8NGE8 314 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 OR4K13Q8NH42 304 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 DUSP19Q8WTR2 217 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 SLC25A36Q96CQ1 311 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 LGALS12Q96DT0 336 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 OMA1Q96E52 524 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 RNFT2Q96EX2 444 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 HS6ST2Q96MM7 605 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 SLC46A1Q96NT5 459 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 SLC38A2Q96QD8 506 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 OR1F2PQ96R84 312 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 MGLLQ99685 303 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 NPAS1Q99742 590 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 ZNF559Q9BR84 538 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 CENPOQ9BU64 300 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 TBL1XR1Q9BZK7 514 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 ULBP3Q9BZM4 244 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 POLR2J2Q9GZM3 115 aaKnown RBP3.15□□□□□ -1.9
LIG4-205ENST00000614526 CCNB1IP1Q9NPC3 277 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 HINT3Q9NQE9 182 aaKnown RBP3.15□□□□□ -1.9
LIG4-205ENST00000614526 UBQLN4Q9NRR5 601 aa3.15□□□□□ -1.9
LIG4-205ENST00000614526 H2AFY2Q9P0M6 372 aaPredicted RBP3.15□□□□□ -1.9
LIG4-205ENST00000614526 ZNF346Q9UL40 294 aaKnown RBP3.15□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms