RNA–Protein interactions for RNA: ENST00000600888.2

CKS1BP3-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 3, humanhuman

BASIC

Gene CKS1BP3, Length 237 nt, Biotype processed pseudogene, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP3-201ENST00000600888 RORAP35398 523 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 MAGEA3P43357 314 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 CCR10P46092 362 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 GABRA4P48169 554 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 LMAN1P49257 510 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 KPNA2P52292 529 aaKnown RBP3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 CDH13P55290 713 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 TPD52P55327 224 aaPredicted RBP3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 PPP1CAP62136 330 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 CX3CL1P78423 397 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 SARNPP82979 210 aaKnown RBP3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 CDC20Q12834 499 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 SNX1Q13596 522 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 LY6DQ14210 128 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 KCNJ11Q14654 390 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 KYNUQ16719 465 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 SLC5A12Q1EHB4 618 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 TYSND1Q2T9J0 566 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 FASTKD1Q53R41 847 aaKnown RBP3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 DNAJC21Q5F1R6 531 aaKnown RBP3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 ZNF789Q5FWF6 425 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 RNASEH2BQ5TBB1 312 aaKnown RBP3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 GARNL3Q5VVW2 1013 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 TMEM211Q6ICI0 200 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 PWWP2BQ6NUJ5 590 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 UNC5DQ6UXZ4 953 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 PPP1R21Q6ZMI0 780 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 FAM92BQ6ZTR7 304 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 SH2D5Q6ZV89 423 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 TAS2R42Q7RTR8 314 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 NOTCH2NLQ7Z3S9 236 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 TMEM135Q86UB9 458 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 AMIGO1Q86WK6 493 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 LMNTD2Q8IXW0 634 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 ZNF383Q8NA42 475 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 OR52E1Q8NGJ3 308 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 OR10S1Q8NGN2 331 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 FLVCR1-AS1Q8TAF5 88 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 FGFBP3Q8TAT2 258 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 ACTRT1Q8TDG2 376 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 GRHL3Q8TE85 626 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 LCN9Q8WX39 176 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 STARD8Q92502 1023 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 ELMO1Q92556 727 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 PTERQ96BW5 349 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 LRR1Q96L50 414 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 MS4A10Q96PG2 267 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 PANX3Q96QZ0 392 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 ABHD1Q96SE0 405 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 NAP1L3Q99457 506 aaPredicted RBP3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 CTRCQ99895 268 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 NUDT16L1Q9BRJ7 211 aaKnown RBP3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 TSSK1BQ9BXA7 367 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 P2RY12Q9H244 342 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 SRMSQ9H3Y6 488 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 FAM96AQ9H5X1 160 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 LHX9Q9NQ69 397 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 CHRAC1Q9NRG0 131 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 ZNF701Q9NV72 531 aaPredicted RBP3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 OR6C2Q9NZP2 312 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 B3GAT1Q9P2W7 334 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 CRNNQ9UBG3 495 aaPredicted RBP3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 SLC2A6Q9UGQ3 507 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 IL17BQ9UHF5 180 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 ANAPC5Q9UJX4 755 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 PPIEQ9UNP9 301 aaKnown RBP3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 ASF1AQ9Y294 204 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 KLK4Q9Y5K2 254 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 PRSS21Q9Y6M0 314 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 AP1M2Q9Y6Q5 423 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 SPTBN1Q01082 2364 aaKnown RBP3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 SCN3AQ9NY46 2000 aa3.2□□□□□ -1.9
CKS1BP3-201ENST00000600888 SPTAN1Q13813 2472 aaKnown RBP3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 USP9XQ93008 2570 aaPredicted RBP3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 SVILO95425 2214 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 A0A0J9YY10 115 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 FEZF1A0PJY2 475 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 OR51F1A6NGY5 319 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 SLC9B1P1A6NJY1 282 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 SDR42E2A6NKP2 422 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 H3BMM5 538 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 J3QKU1 62 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 PGRMC1O00264 195 aaKnown RBP3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 PFDN6O15212 129 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 ZSCAN12O43309 604 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 ADAM20O43506 726 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 OR1I1O60431 355 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 PRKRAO75569 313 aaKnown RBP3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 SCRG1O75711 98 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 NADKO95544 446 aaPredicted RBP3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 WDPCPO95876 746 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 CLPTM1O96005 669 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 KRT14P02533 472 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 APOA4P06727 396 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 KLK3P07288 261 aaPredicted RBP3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 CAPN1P07384 714 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 OR2T7P0C7T2 308 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 NR2F1P10589 423 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 ERGP11308 486 aa3.19□□□□□ -1.9
CKS1BP3-201ENST00000600888 UGT2B7P16662 529 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms