RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 BTLAQ7Z6A9 289 aa20.28■□□□□ 0.84
CCDC9-204ENST00000599398 HMGN2P46Q86SG4 172 aa20.28■□□□□ 0.84
CCDC9-204ENST00000599398 CDH24Q86UP0 819 aa20.28■□□□□ 0.84
CCDC9-204ENST00000599398 ZNF619Q8N2I2 560 aa20.28■□□□□ 0.84
CCDC9-204ENST00000599398 ATP6V1C2Q8NEY4 427 aa20.28■□□□□ 0.84
CCDC9-204ENST00000599398 ADGRG7Q96K78 797 aa20.28■□□□□ 0.84
CCDC9-204ENST00000599398 THUMPD3Q9BV44 507 aaKnown RBP20.28■□□□□ 0.84
CCDC9-204ENST00000599398 LAT2Q9GZY6 243 aa20.28■□□□□ 0.84
CCDC9-204ENST00000599398 RMND5AQ9H871 391 aa20.28■□□□□ 0.84
CCDC9-204ENST00000599398 ITGB1BP2Q9UKP3 347 aa20.28■□□□□ 0.84
CCDC9-204ENST00000599398 AKAP6Q13023 2319 aa20.27■□□□□ 0.84
CCDC9-204ENST00000599398 A8MXE2 369 aa20.27■□□□□ 0.84
CCDC9-204ENST00000599398 MSTNO14793 375 aa20.27■□□□□ 0.84
CCDC9-204ENST00000599398 TGDSO95455 350 aa20.27■□□□□ 0.84
CCDC9-204ENST00000599398 H6PDO95479 791 aa20.27■□□□□ 0.84
CCDC9-204ENST00000599398 KRT75O95678 551 aa20.27■□□□□ 0.84
CCDC9-204ENST00000599398 SHC1P29353 583 aa20.27■□□□□ 0.84
CCDC9-204ENST00000599398 STX1BP61266 288 aa20.27■□□□□ 0.84
CCDC9-204ENST00000599398 SYPL1Q16563 259 aa20.27■□□□□ 0.84
CCDC9-204ENST00000599398 OSTF1Q92882 214 aa20.27■□□□□ 0.84
CCDC9-204ENST00000599398 ARSGQ96EG1 525 aa20.27■□□□□ 0.84
CCDC9-204ENST00000599398 MRGPRX4Q96LA9 322 aa20.27■□□□□ 0.84
CCDC9-204ENST00000599398 GPATCH1Q9BRR8 931 aaKnown RBP20.27■□□□□ 0.84
CCDC9-204ENST00000599398 OPN3Q9H1Y3 402 aaPredicted RBP20.27■□□□□ 0.84
CCDC9-204ENST00000599398 DNAJB12Q9NXW2 375 aaKnown RBP20.27■□□□□ 0.84
CCDC9-204ENST00000599398 PRAMEF27A3QJZ7 478 aa20.26■□□□□ 0.83
CCDC9-204ENST00000599398 GJE1A6NN92 205 aa20.26■□□□□ 0.83
CCDC9-204ENST00000599398 EFNA2O43921 213 aa20.26■□□□□ 0.83
CCDC9-204ENST00000599398 CTAG2O75638 210 aa20.26■□□□□ 0.83
CCDC9-204ENST00000599398 GUSBP08236 651 aa20.26■□□□□ 0.83
CCDC9-204ENST00000599398 IDH3AP50213 366 aa20.26■□□□□ 0.83
CCDC9-204ENST00000599398 CARD18P57730 90 aa20.26■□□□□ 0.83
CCDC9-204ENST00000599398 TXNL4AP83876 142 aaKnown RBP20.26■□□□□ 0.83
CCDC9-204ENST00000599398 CHRNEQ04844 493 aa20.26■□□□□ 0.83
CCDC9-204ENST00000599398 FGFBP1Q14512 234 aa20.26■□□□□ 0.83
CCDC9-204ENST00000599398 COX20Q5RI15 118 aa20.26■□□□□ 0.83
CCDC9-204ENST00000599398 C6orf10Q5SRN2 563 aa20.26■□□□□ 0.83
CCDC9-204ENST00000599398 ANKFN1Q8N957 763 aa20.26■□□□□ 0.83
CCDC9-204ENST00000599398 VPS33AQ96AX1 596 aa20.26■□□□□ 0.83
CCDC9-204ENST00000599398 ITCHQ96J02 903 aa20.26■□□□□ 0.83
CCDC9-204ENST00000599398 EBF4Q9BQW3 602 aa20.26■□□□□ 0.83
CCDC9-204ENST00000599398 POLDIP3Q9BY77 421 aaKnown RBP20.26■□□□□ 0.83
CCDC9-204ENST00000599398 SAP130Q9H0E3 1048 aa20.26■□□□□ 0.83
CCDC9-204ENST00000599398 SLC6A13Q9NSD5 602 aa20.26■□□□□ 0.83
CCDC9-204ENST00000599398 CLEC4AQ9UMR7 237 aa20.26■□□□□ 0.83
CCDC9-204ENST00000599398 LIPT1Q9Y234 373 aa20.26■□□□□ 0.83
CCDC9-204ENST00000599398 SLC35A3Q9Y2D2 325 aa20.26■□□□□ 0.83
CCDC9-204ENST00000599398 FAM234BA2RU67 622 aa20.25■□□□□ 0.83
CCDC9-204ENST00000599398 A6NNC1 897 aa20.25■□□□□ 0.83
CCDC9-204ENST00000599398 NR2F1P10589 423 aa20.25■□□□□ 0.83
CCDC9-204ENST00000599398 EPXP11678 715 aa20.25■□□□□ 0.83
CCDC9-204ENST00000599398 AQP5P55064 265 aa20.25■□□□□ 0.83
CCDC9-204ENST00000599398 TMEM176BQ3YBM2 270 aaPredicted RBP20.25■□□□□ 0.83
CCDC9-204ENST00000599398 FBXW10Q5XX13 1052 aa20.25■□□□□ 0.83
CCDC9-204ENST00000599398 MSANTD1Q6ZTZ1 278 aa20.25■□□□□ 0.83
CCDC9-204ENST00000599398 FAM214BQ7L5A3 538 aa20.25■□□□□ 0.83
CCDC9-204ENST00000599398 ZFP90Q8TF47 636 aa20.25■□□□□ 0.83
CCDC9-204ENST00000599398 OIT3Q8WWZ8 545 aa20.25■□□□□ 0.83
CCDC9-204ENST00000599398 ZNF524Q96C55 264 aa20.25■□□□□ 0.83
CCDC9-204ENST00000599398 ZG16BQ96DA0 208 aa20.25■□□□□ 0.83
CCDC9-204ENST00000599398 REXO5Q96IC2 774 aaKnown RBP20.25■□□□□ 0.83
CCDC9-204ENST00000599398 TRNT1Q96Q11 434 aaKnown RBP20.25■□□□□ 0.83
CCDC9-204ENST00000599398 QRSL1Q9H0R6 528 aaKnown RBP20.25■□□□□ 0.83
CCDC9-204ENST00000599398 TIGARQ9NQ88 270 aa20.25■□□□□ 0.83
CCDC9-204ENST00000599398 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.25■□□□□ 0.83
CCDC9-204ENST00000599398 PROCRQ9UNN8 238 aa20.25■□□□□ 0.83
CCDC9-204ENST00000599398 EMC9Q9Y3B6 208 aa20.25■□□□□ 0.83
CCDC9-204ENST00000599398 ABCA4P78363 2273 aa20.24■□□□□ 0.83
CCDC9-204ENST00000599398 OTOGQ6ZRI0 2925 aa20.24■□□□□ 0.83
CCDC9-204ENST00000599398 CHRM4P08173 479 aa20.24■□□□□ 0.83
CCDC9-204ENST00000599398 PGCP20142 388 aa20.24■□□□□ 0.83
CCDC9-204ENST00000599398 SLC7A1P30825 629 aa20.24■□□□□ 0.83
CCDC9-204ENST00000599398 CRATP43155 626 aa20.24■□□□□ 0.83
CCDC9-204ENST00000599398 KCNJ5P48544 419 aa20.24■□□□□ 0.83
CCDC9-204ENST00000599398 CTBP2P56545 445 aa20.24■□□□□ 0.83
CCDC9-204ENST00000599398 SELENBP1Q13228 472 aa20.24■□□□□ 0.83
CCDC9-204ENST00000599398 GMPPAQ96IJ6 420 aaPredicted RBP20.24■□□□□ 0.83
CCDC9-204ENST00000599398 CLEC4MQ9H2X3 399 aaPredicted RBP20.24■□□□□ 0.83
CCDC9-204ENST00000599398 NTN1O95631 604 aa20.23■□□□□ 0.83
CCDC9-204ENST00000599398 RYKP34925 604 aa20.23■□□□□ 0.83
CCDC9-204ENST00000599398 PGM1P36871 562 aa20.23■□□□□ 0.83
CCDC9-204ENST00000599398 SESN3P58005 492 aa20.23■□□□□ 0.83
CCDC9-204ENST00000599398 KCNJ10P78508 379 aa20.23■□□□□ 0.83
CCDC9-204ENST00000599398 FAM27E3Q08E93 113 aa20.23■□□□□ 0.83
CCDC9-204ENST00000599398 GUSBP1Q15486 140 aa20.23■□□□□ 0.83
CCDC9-204ENST00000599398 GTDC1Q4AE62 458 aa20.23■□□□□ 0.83
CCDC9-204ENST00000599398 SLC25A53Q5H9E4 307 aa20.23■□□□□ 0.83
CCDC9-204ENST00000599398 ZNF474Q6S9Z5 364 aaPredicted RBP20.23■□□□□ 0.83
CCDC9-204ENST00000599398 LRRC74BQ6ZQY2 392 aa20.23■□□□□ 0.83
CCDC9-204ENST00000599398 ZNF563Q8TA94 476 aa20.23■□□□□ 0.83
CCDC9-204ENST00000599398 CKAP2Q8WWK9 683 aa20.23■□□□□ 0.83
CCDC9-204ENST00000599398 TMEM234Q8WY98 164 aa20.23■□□□□ 0.83
CCDC9-204ENST00000599398 ROBO4Q8WZ75 1007 aa20.23■□□□□ 0.83
CCDC9-204ENST00000599398 ST8SIA1Q92185 356 aa20.23■□□□□ 0.83
CCDC9-204ENST00000599398 AURKBQ96GD4 344 aaPredicted RBP20.23■□□□□ 0.83
CCDC9-204ENST00000599398 SLC39A3Q9BRY0 314 aa20.23■□□□□ 0.83
CCDC9-204ENST00000599398 CCDC28BQ9BUN5 200 aa20.23■□□□□ 0.83
CCDC9-204ENST00000599398 SLC38A1Q9H2H9 487 aa20.23■□□□□ 0.83
CCDC9-204ENST00000599398 TPT1P8Q9HAU6 139 aa20.23■□□□□ 0.83
CCDC9-204ENST00000599398 RASSF1Q9NS23 344 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms