RNA–Protein interactions for RNA: ENST00000594973.5

SHKBP1-205, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-205ENST00000594973 CLCA2Q9UQC9 943 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 CDH10Q9Y6N8 788 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 ARRDC5A6NEK1 342 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 SGK494L7N484 410 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 CPMP14384 443 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 ZP3P21754 424 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 SDC2P34741 201 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 CRISP1P54107 249 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 RAB14P61106 215 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 LSM11P83369 360 aaKnown RBP eCLIP15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 RNLSQ5VYX0 342 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 MFSD12Q6NUT3 480 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 GLCCI1Q86VQ1 547 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 Q8N402 240 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 LRRC17Q8N6Y2 441 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 ZBTB44Q8NCP5 570 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 CDS1Q92903 461 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 KLHL15Q96M94 604 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 CLEC4MQ9H2X3 399 aaPredicted RBP15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 C11orf16Q9NQ32 467 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 ACAD8Q9UKU7 415 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 SDK1Q7Z5N4 2213 aa15.85■□□□□ 0.13
SHKBP1-205ENST00000594973 H3BN98 237 aa15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 KHNYNO15037 678 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 FGF17O60258 216 aa15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 WDPCPO95876 746 aa15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 SOX3P41225 446 aa15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 TGM4P49221 684 aa15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 PDX1P52945 283 aa15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 MLLT11Q13015 90 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 SMAD2Q15796 467 aaKnown RBP15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 PODNL1Q6PEZ8 512 aa15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 PHC2Q8IXK0 858 aa15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 MS4A4EQ96PG1 132 aa15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 TMEM43Q9BTV4 400 aa15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 MND1Q9BWT6 205 aa15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 SCPEP1Q9HB40 452 aa15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 ZFP64Q9NPA5 681 aa15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 FTSJ1Q9UET6 329 aa15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 FAM170BA6NMN3 283 aa15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 FAAHO00519 579 aa15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 CHP2O43745 196 aa15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 PLOD3O60568 738 aa15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 ZIC2O95409 532 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 ADAP00813 363 aa15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 CNR2P34972 360 aa15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 FLYWCH1Q4VC44 716 aa15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 KLHL22Q53GT1 634 aa15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 PGBD2Q6P3X8 592 aa15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 LMX1AQ8TE12 382 aa15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 ADAP2Q9NPF8 381 aa15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 SLC13A4Q9UKG4 626 aa15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 GPR55Q9Y2T6 319 aaPredicted RBP15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 ZNF175Q9Y473 711 aa15.84■□□□□ 0.13
SHKBP1-205ENST00000594973 CSO75390 466 aaKnown RBP15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 AVPR1BP47901 424 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 FZD5Q13467 585 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 NCF4Q15080 339 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 USP53Q70EK8 1073 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 SAMD14Q8IZD0 417 aaPredicted RBP15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 OR2L13Q8N349 312 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 AVL9Q8NBF6 648 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 ST8SIA4Q92187 359 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 MARC2Q969Z3 335 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 RADILQ96JH8 1075 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 GFM1Q96RP9 751 aaKnown RBP15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 PINK1Q9BXM7 581 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 RBCK1Q9BYM8 510 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 PRO3102Q9H379 93 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 SLC25A19Q9HC21 320 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 LYRM4Q9HD34 91 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 TXNL4BQ9NX01 149 aaKnown RBP15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 POMT2Q9UKY4 750 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 MGAT4BQ9UQ53 548 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 LIPT1Q9Y234 373 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 SPACA6W5XKT8 324 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 COL6A3P12111 3177 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 SLC9B1P1A6NJY1 282 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 ZAR1LA6NP61 321 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 GALR3O60755 368 aaPredicted RBP15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 RDH16O75452 317 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 APEX1P27695 318 aaKnown RBP15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 CD38P28907 300 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 SMIM11AP58511 58 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 HSF2Q03933 536 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 EXOSC2Q13868 293 aaKnown RBP15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 PTCHD4Q6ZW05 846 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 UFD1Q92890 307 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 FBXW5Q969U6 566 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 POLR2J3Q9H1A7 115 aaKnown RBP15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 MED28Q9H204 178 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 SEMA6CQ9H3T2 930 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 MAN2C1Q9NTJ4 1040 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 REV1Q9UBZ9 1251 aa15.83■□□□□ 0.12
SHKBP1-205ENST00000594973 A0A1W2PRQ8 180 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 PCP4L1A6NKN8 68 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 CYR61O00622 381 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 CASC3O15234 703 aaKnown RBP15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 UBXN7O94888 489 aa15.82■□□□□ 0.12
SHKBP1-205ENST00000594973 ATXN8OSP0DMR3 200 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms