RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 AGR2O95994 175 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 CSTAP01040 98 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 C1QCP02747 245 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 RAF1P04049 648 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 HRGP04196 525 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 UBTFL6P0CB48 400 aaPredicted RBP11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 PRKCAP17252 672 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 ADH6P28332 368 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 KHKP50053 298 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 HPCAP84074 193 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 QPRTQ15274 297 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 TMEM176BQ3YBM2 270 aaPredicted RBP11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 GPAT3Q53EU6 434 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 SAXO2Q658L1 398 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 ANKRD34AQ69YU3 496 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 GTF2IRD2BQ6EKJ0 949 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 PAMR1Q6UXH9 720 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 ZNF550Q7Z398 422 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 GTF2IRD2Q86UP8 949 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 OR6K3Q8NGY3 331 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 OR5W2Q8NH69 310 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 DYDC1Q8WWB3 177 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 ROBO4Q8WZ75 1007 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 ARSGQ96EG1 525 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 MAELQ96JY0 434 aaKnown RBP11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 PANX1Q96RD7 426 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 FOXC2Q99958 501 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 INPP5KQ9BT40 448 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 THUMPD3Q9BV44 507 aaKnown RBP11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 NMUR2Q9GZQ4 415 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 ZNF350Q9GZX5 532 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 C12orf49Q9H741 205 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 TIGARQ9NQ88 270 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 ZNF226Q9NYT6 803 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 UBDO15205 165 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 EFNA2O43921 213 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 GSNP06396 782 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 PGRP06401 933 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 SLC7A1P30825 629 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 CCKARP32238 428 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 PPP2R2AP63151 447 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 SELENBP1Q13228 472 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 GUSBP1Q15486 140 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 ZNF141Q15928 474 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 ZNF239Q16600 458 aaKnown RBP11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 EPGNQ6UW88 154 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 ZNF621Q6ZSS3 439 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 EIF3MQ7L2H7 374 aaKnown RBP11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 HMGN2P46Q86SG4 172 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 RNF130Q86XS8 419 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 TRIML2Q8N7C3 387 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 MIPOL1Q8TD10 442 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 CPNE4Q96A23 557 aaPredicted RBP11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 ROPN1LQ96C74 230 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 NEURL3Q96EH8 262 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 PIK3IP1Q96FE7 263 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 MRGPRX4Q96LA9 322 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 C7orf26Q96N11 449 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 CCDC115Q96NT0 180 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 OR52E6Q96RD3 313 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 SRXN1Q9BYN0 137 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 PLEKHF2Q9H8W4 249 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 PLSCR4Q9NRQ2 329 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 GLRX2Q9NS18 164 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 INTS9Q9NV88 658 aaKnown RBP11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 BTNL2Q9UIR0 455 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 KCNE5Q9UJ90 142 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 WDR45Q9Y484 360 aa11.36□□□□□ -0.59
NPLOC4-213ENST00000573519 IGHV3-15A0A0B4J1V0 119 aa11.35□□□□□ -0.59
NPLOC4-213ENST00000573519 A0A1W2PNR3 127 aa11.35□□□□□ -0.59
NPLOC4-213ENST00000573519 CCDC154A6NI56 674 aa11.35□□□□□ -0.59
NPLOC4-213ENST00000573519 KIAA0513O60268 411 aa11.35□□□□□ -0.59
NPLOC4-213ENST00000573519 SLC22A3O75751 556 aa11.35□□□□□ -0.59
NPLOC4-213ENST00000573519 PABPC4LP0CB38 370 aaKnown RBP11.35□□□□□ -0.59
NPLOC4-213ENST00000573519 IDO1P14902 403 aa11.35□□□□□ -0.59
NPLOC4-213ENST00000573519 AGTR1P30556 359 aa11.35□□□□□ -0.59
NPLOC4-213ENST00000573519 CDKN2CP42773 168 aa11.35□□□□□ -0.59
NPLOC4-213ENST00000573519 SKP2Q13309 424 aa11.35□□□□□ -0.59
NPLOC4-213ENST00000573519 MAPK14Q16539 360 aa11.35□□□□□ -0.59
NPLOC4-213ENST00000573519 TIGD2Q4W5G0 525 aa11.35□□□□□ -0.59
NPLOC4-213ENST00000573519 PDCD4Q53EL6 469 aaKnown RBP11.35□□□□□ -0.59
NPLOC4-213ENST00000573519 TMEM201Q5SNT2 666 aa11.35□□□□□ -0.59
NPLOC4-213ENST00000573519 TYW3Q6IPR3 259 aaKnown RBP11.35□□□□□ -0.59
NPLOC4-213ENST00000573519 HEPHL1Q6MZM0 1159 aa11.35□□□□□ -0.59
NPLOC4-213ENST00000573519 STK32CQ86UX6 486 aa11.35□□□□□ -0.59
NPLOC4-213ENST00000573519 ZNF619Q8N2I2 560 aa11.35□□□□□ -0.59
NPLOC4-213ENST00000573519 OR9I1Q8NGQ6 314 aa11.35□□□□□ -0.59
NPLOC4-213ENST00000573519 ZNF563Q8TA94 476 aa11.35□□□□□ -0.59
NPLOC4-213ENST00000573519 PNPT1Q8TCS8 783 aaKnown RBP11.35□□□□□ -0.59
NPLOC4-213ENST00000573519 ZFP90Q8TF47 636 aa11.35□□□□□ -0.59
NPLOC4-213ENST00000573519 ABHD3Q8WU67 409 aa11.35□□□□□ -0.59
NPLOC4-213ENST00000573519 ZNF524Q96C55 264 aa11.35□□□□□ -0.59
NPLOC4-213ENST00000573519 LAT2Q9GZY6 243 aa11.35□□□□□ -0.59
NPLOC4-213ENST00000573519 QRSL1Q9H0R6 528 aaKnown RBP11.35□□□□□ -0.59
NPLOC4-213ENST00000573519 FANCFQ9NPI8 374 aa11.35□□□□□ -0.59
NPLOC4-213ENST00000573519 PCNX3Q9H6A9 2034 aa11.35□□□□□ -0.59
NPLOC4-213ENST00000573519 NUP214P35658 2090 aaPredicted RBP11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 ATE1O95260 518 aa11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 H6PDO95479 791 aa11.34□□□□□ -0.59
NPLOC4-213ENST00000573519 PGCP20142 388 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms