RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 LIMS3P0CW19 117 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 LIMS4P0CW20 117 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 ULK3Q6PHR2 472 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 KIRREL2Q6UWL6 708 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 LINC00114Q6XXX2 140 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 THSD4Q6ZMP0 1018 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 KMT5CQ86Y97 462 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 CADM2Q8N3J6 435 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 TSLPQ969D9 159 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 C6orf62Q9GZU0 229 aaPredicted RBP16.69■□□□□ 0.26
SMPD3-211ENST00000568373 FN3KQ9H479 309 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 EXOGQ9Y2C4 368 aaKnown RBP16.69■□□□□ 0.26
SMPD3-211ENST00000568373 FAM183AA6NL82 134 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 WWP2O00308 870 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 POLR1CO15160 346 aaPredicted RBP16.69■□□□□ 0.26
SMPD3-211ENST00000568373 DYRK3O43781 588 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 HCN1O60741 890 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 SULT1C4O75897 302 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 NGFRP08138 427 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 RGS21Q2M5E4 152 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 NDUFAF6Q330K2 333 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 TSSK4Q6SA08 328 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 GID4Q8IVV7 300 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 TMEM151BQ8IW70 566 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 ZNF321PQ8N8H1 164 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 OR4F15Q8NGB8 312 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 SLC46A1Q96NT5 459 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 LMF1Q96S06 567 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 IER2Q9BTL4 223 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 ISYNA1Q9NPH2 558 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 RPS6KB2Q9UBS0 482 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 SPEGQ15772 3267 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 TRAV27A0A087WT01 109 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 SOCS6O14544 535 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 MAGEB3O15480 346 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 PTP4A3O75365 173 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 FBLP22087 321 aaKnown RBP16.68■□□□□ 0.26
SMPD3-211ENST00000568373 SOX6P35712 828 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 SLC1A3P43003 542 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 RAB15P59190 212 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 KLHL26Q53HC5 615 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 LYSMD4Q5XG99 296 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 PLBD1Q6P4A8 553 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 CHPT1Q8WUD6 406 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 GATAD2BQ8WXI9 593 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 TM9SF4Q92544 642 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 EFHD2Q96C19 240 aaPredicted RBP16.68■□□□□ 0.26
SMPD3-211ENST00000568373 CLIP3Q96DZ5 547 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 IFT27Q9BW83 186 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 ZNF304Q9HCX3 659 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 CMC2Q9NRP2 79 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 SERTAD3Q9UJW9 196 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 SLC35A3Q9Y2D2 325 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 SPIN1Q9Y657 262 aaPredicted RBP16.68■□□□□ 0.26
SMPD3-211ENST00000568373 CLCA3PQ9Y6N3 262 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 HEATR5AQ86XA9 2040 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 FAM86C2PA6NEL3 165 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 A8MUA0 341 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 PRKNO60260 465 aaPredicted RBP16.68■□□□□ 0.26
SMPD3-211ENST00000568373 IGHA1P01876 353 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 RORAP35398 523 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 PPICP45877 212 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 SLC35F1Q5T1Q4 408 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 DCDC5Q6ZRR9 648 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 OAFQ86UD1 273 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 LAPTM4BQ86VI4 370 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 ZNF485Q8NCK3 441 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 OR51A7Q8NH64 312 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 CCDC74AQ96AQ1 378 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 OTULINQ96BN8 352 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 TRMT61AQ96FX7 289 aaKnown RBP16.68■□□□□ 0.26
SMPD3-211ENST00000568373 NUDT22Q9BRQ3 303 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 ASPNQ9BXN1 380 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 OR8D2Q9GZM6 311 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 SSR3Q9UNL2 185 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 NUP210LQ5VU65 1888 aa16.68■□□□□ 0.26
SMPD3-211ENST00000568373 SYNDIG1LA6NDD5 238 aa16.67■□□□□ 0.26
SMPD3-211ENST00000568373 IGKV3-11P04433 115 aa16.67■□□□□ 0.26
SMPD3-211ENST00000568373 TSPAN19P0C672 248 aa16.67■□□□□ 0.26
SMPD3-211ENST00000568373 FOXK2Q01167 660 aa16.67■□□□□ 0.26
SMPD3-211ENST00000568373 CRYZQ08257 329 aaKnown RBP16.67■□□□□ 0.26
SMPD3-211ENST00000568373 TPBGQ13641 420 aa16.67■□□□□ 0.26
SMPD3-211ENST00000568373 ELAVL1Q15717 326 aaKnown RBP16.67■□□□□ 0.26
SMPD3-211ENST00000568373 NIPAL3Q6P499 406 aa16.67■□□□□ 0.26
SMPD3-211ENST00000568373 LHFPL3Q86UP9 236 aa16.67■□□□□ 0.26
SMPD3-211ENST00000568373 SLC2A12Q8TD20 617 aa16.67■□□□□ 0.26
SMPD3-211ENST00000568373 OIT3Q8WWZ8 545 aa16.67■□□□□ 0.26
SMPD3-211ENST00000568373 ARHGAP9Q9BRR9 750 aa16.67■□□□□ 0.26
SMPD3-211ENST00000568373 HOXD1Q9GZZ0 328 aa16.67■□□□□ 0.26
SMPD3-211ENST00000568373 ZNF768Q9H5H4 540 aaKnown RBP16.67■□□□□ 0.26
SMPD3-211ENST00000568373 UBQLN4Q9NRR5 601 aa16.67■□□□□ 0.26
SMPD3-211ENST00000568373 FGF21Q9NSA1 209 aa16.67■□□□□ 0.26
SMPD3-211ENST00000568373 CCDC163A0A0D9SF12 145 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 A0A1B0GX78 115 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 TCRBV16S1A1N1A0A5B0 115 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 ZNF670-ZNF695F2Z2N8 137 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 IL33O95760 270 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 DDAH2O95865 285 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 ATP6V1E1P36543 226 aa16.66■□□□□ 0.26
SMPD3-211ENST00000568373 DHPSP49366 369 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms