RNA–Protein interactions for RNA: ENST00000547517.5

RAB5C-204, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 1 (best) BASIC

Gene RAB5C, Length 1,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-204ENST00000547517 A0A1W2PP18 115 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 TMEM247A6NEH6 219 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 AGAP5A6NIR3 686 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 RCBTB2O95199 551 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 NUDT7P0C024 238 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 IGFBP2P18065 325 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 PGCP20142 388 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 RPS4Y1P22090 263 aaKnown RBP10.63□□□□□ -0.71
RAB5C-204ENST00000547517 UQCRC1P31930 480 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 OPRM1P35372 400 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 CRISP3P54108 245 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 RAC1P63000 192 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 SIRPAP78324 504 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 KCNJ10P78508 379 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 PLAURQ03405 335 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 RGNQ15493 299 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 MAPK11Q15759 364 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 CTU2Q2VPK5 515 aaKnown RBP10.63□□□□□ -0.71
RAB5C-204ENST00000547517 LRIF1Q5T3J3 769 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 GDF7Q7Z4P5 450 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 MSRB3Q8IXL7 192 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 LILRA2Q8N149 483 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 CNEP1R1Q8N9A8 125 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 ATP6V1C2Q8NEY4 427 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 OR10D3Q8NH80 312 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 OR2V1Q8NHB1 315 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 SLC38A5Q8WUX1 472 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 MAL2Q969L2 176 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 TMEM19Q96HH6 336 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 MRGPRX4Q96LA9 322 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 KLHL15Q96M94 604 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 SPOCK3Q9BQ16 436 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 TRIM8Q9BZR9 551 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 ENKD1Q9H0I2 346 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 RAD21L1Q9H4I0 556 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 CALML5Q9NZT1 146 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 VAPAQ9P0L0 249 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 ZNF175Q9Y473 711 aa10.63□□□□□ -0.71
RAB5C-204ENST00000547517 DSPPQ9NZW4 1301 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 CELSR2Q9HCU4 2923 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 HCFC1P51610 2035 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 A0A0J9YW62 118 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 A0A1W2PNV4 684 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 ANGPT2O15123 496 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 ATP8B1O43520 1251 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 CXCL13O43927 109 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 SYNGR4O95473 234 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 NTN1O95631 604 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 IL18BPO95998 194 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 DBIP07108 87 aaKnown RBP10.62□□□□□ -0.71
RAB5C-204ENST00000547517 TFPTP0C1Z6 253 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 FCGR2AP12318 317 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 IL7RP16871 459 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 ADH6P28332 368 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 RYKP34925 604 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 MDH1P40925 334 aaKnown RBP10.62□□□□□ -0.71
RAB5C-204ENST00000547517 SLC6A8P48029 635 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 CPA2P48052 419 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 ARFIP2P53365 341 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 SESN3P58005 492 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 FADDQ13158 208 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 SELENBP1Q13228 472 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 SNTB1Q13884 538 aaKnown RBP10.62□□□□□ -0.71
RAB5C-204ENST00000547517 GNA13Q14344 377 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 LIN52Q52LA3 116 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 GCNT6Q5T4J0 391 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 MRPL2Q5T653 305 aaKnown RBP10.62□□□□□ -0.71
RAB5C-204ENST00000547517 HBMQ6B0K9 141 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 OR2A2Q6IF42 318 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 ESPNLQ6ZVH7 1005 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 DHDDSQ86SQ9 333 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 LUZP2Q86TE4 346 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 PEX5LQ8IYB4 626 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 ACBD4Q8NC06 268 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 ZNF563Q8TA94 476 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 ST8SIA1Q92185 356 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 CNOT9Q92600 299 aaKnown RBP10.62□□□□□ -0.71
RAB5C-204ENST00000547517 LRRC46Q96FV0 321 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 ADGRG7Q96K78 797 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 TREX2Q9BQ50 279 aaPredicted RBP10.62□□□□□ -0.71
RAB5C-204ENST00000547517 PRRG4Q9BZD6 226 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 CCDC134Q9H6E4 229 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 RNF122Q9H9V4 155 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 CACYBPQ9HB71 228 aaKnown RBP10.62□□□□□ -0.71
RAB5C-204ENST00000547517 A4GALTQ9NPC4 353 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 EXOSC3Q9NQT5 275 aaKnown RBP10.62□□□□□ -0.71
RAB5C-204ENST00000547517 THUMPD1Q9NXG2 353 aaKnown RBP10.62□□□□□ -0.71
RAB5C-204ENST00000547517 DNAJB12Q9NXW2 375 aaKnown RBP10.62□□□□□ -0.71
RAB5C-204ENST00000547517 LEF1Q9UJU2 399 aaPredicted RBP10.62□□□□□ -0.71
RAB5C-204ENST00000547517 PACSIN3Q9UKS6 424 aa10.62□□□□□ -0.71
RAB5C-204ENST00000547517 MCTS1Q9ULC4 181 aaKnown RBP10.62□□□□□ -0.71
RAB5C-204ENST00000547517 TRBV5-3A0A0A0MS03 114 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 GJE1A6NN92 205 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 AP3D1O14617 1153 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 ADAMDEC1O15204 470 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 EFNA2O43921 213 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 DNAJA2O60884 412 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 ADAM11O75078 769 aa10.61□□□□□ -0.71
RAB5C-204ENST00000547517 TNFSF13O75888 250 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms