RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 DDOSTP39656 456 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 CDKN2CP42773 168 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 SLC14A1Q13336 389 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 CEACAM7Q14002 265 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 ZNF574Q6ZN55 896 aaPredicted RBP7.34□□□□□ -1.23
VPS13D-211ENST00000543710 Q6ZVU0 165 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 NLGN4XQ8N0W4 816 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 CSNK1A1LQ8N752 337 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 NLGN4YQ8NFZ3 816 aaPredicted RBP7.34□□□□□ -1.23
VPS13D-211ENST00000543710 PCYT2Q99447 389 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 WASH6PQ9NQA3 447 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 DIMT1Q9UNQ2 313 aaKnown RBP7.34□□□□□ -1.23
VPS13D-211ENST00000543710 ZNF840PA6NDX5 716 aa7.34□□□□□ -1.24
VPS13D-211ENST00000543710 TMEM233B4DJY2 109 aa7.34□□□□□ -1.24
VPS13D-211ENST00000543710 HSBP1L1C9JCN9 74 aa7.34□□□□□ -1.24
VPS13D-211ENST00000543710 GABBR2O75899 941 aa7.34□□□□□ -1.24
VPS13D-211ENST00000543710 CPOXP36551 454 aa7.34□□□□□ -1.24
VPS13D-211ENST00000543710 GCGRP47871 477 aa7.34□□□□□ -1.24
VPS13D-211ENST00000543710 NUMBP49757 651 aa7.34□□□□□ -1.24
VPS13D-211ENST00000543710 SNTB2Q13425 540 aaKnown RBP7.34□□□□□ -1.24
VPS13D-211ENST00000543710 CCBE1Q6UXH8 406 aaPredicted RBP7.34□□□□□ -1.24
VPS13D-211ENST00000543710 LARP4Q71RC2 724 aaKnown RBP eCLIP7.34□□□□□ -1.24
VPS13D-211ENST00000543710 ACBD4Q8NC06 268 aa7.34□□□□□ -1.24
VPS13D-211ENST00000543710 LFNGQ8NES3 379 aa7.34□□□□□ -1.24
VPS13D-211ENST00000543710 PROKR1Q8TCW9 393 aa7.34□□□□□ -1.24
VPS13D-211ENST00000543710 ALG8Q9BVK2 526 aa7.34□□□□□ -1.24
VPS13D-211ENST00000543710 OR52A5Q9H2C5 316 aa7.34□□□□□ -1.24
VPS13D-211ENST00000543710 TEX10Q9NXF1 929 aaPredicted RBP7.34□□□□□ -1.24
VPS13D-211ENST00000543710 NDUFAF4Q9P032 175 aa7.34□□□□□ -1.24
VPS13D-211ENST00000543710 CYB5R1Q9UHQ9 305 aa7.34□□□□□ -1.24
VPS13D-211ENST00000543710 RIMS3Q9UJD0 308 aa7.34□□□□□ -1.24
VPS13D-211ENST00000543710 HSPB11Q9Y547 144 aa7.34□□□□□ -1.24
VPS13D-211ENST00000543710 PCDHGA8Q9Y5G5 932 aa7.34□□□□□ -1.24
VPS13D-211ENST00000543710 GPR45Q9Y5Y3 372 aa7.34□□□□□ -1.24
VPS13D-211ENST00000543710 IMPA2O14732 288 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 TAAR5O14804 337 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 HCRTR2O43614 444 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 PRSS3P35030 304 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 MAGEA3P43357 314 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 ERVK-16P61578 105 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 FGFBP1Q14512 234 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 MLC1Q15049 377 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 MPEG1Q2M385 716 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 RNASE10Q5GAN6 216 aaKnown RBP7.33□□□□□ -1.24
VPS13D-211ENST00000543710 OVCH1Q7RTY7 1134 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 SNX29P2Q8IUI4 249 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 TEX26Q8N6G2 289 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 HUS1BQ8NHY5 278 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 POC1BQ8TC44 478 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 CD300LFQ8TDQ1 290 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 MMABQ96EY8 250 aaPredicted RBP7.33□□□□□ -1.24
VPS13D-211ENST00000543710 TBX5Q99593 518 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 TMEM185BQ9H7F4 350 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 MOB1AQ9H8S9 216 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 APMAPQ9HDC9 416 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 C19orf12Q9NSK7 152 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 PHIPQ8WWQ0 1821 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 ANHXE9PGG2 379 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 SCAMP1O15126 338 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 ENSAO43768 121 aaKnown RBP7.33□□□□□ -1.24
VPS13D-211ENST00000543710 LCMT2O60294 686 aaKnown RBP7.33□□□□□ -1.24
VPS13D-211ENST00000543710 HLA-DMAP28067 261 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 HYAL1Q12794 435 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 DOC2AQ14183 400 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 GRB7Q14451 532 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 PPP1R3AQ16821 1122 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 AWAT2Q6E213 333 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 OPN5Q6U736 354 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 ADAMTSL4Q6UY14 1074 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 ISCA2Q86U28 154 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 GPR137CQ8N3F9 429 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 CD200R1Q8TD46 325 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 CREB3L4Q8TEY5 395 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 BCL7CQ8WUZ0 217 aaPredicted RBP7.33□□□□□ -1.24
VPS13D-211ENST00000543710 SORT1Q99523 831 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 KLF16Q9BXK1 252 aaPredicted RBP7.33□□□□□ -1.24
VPS13D-211ENST00000543710 TRAV17A0A0B4J275 112 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 C13orf42A0A1B0GVH6 325 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 OR5K3A6NET4 321 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 METTL15A6NJ78 407 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 ARGFXA6NJG6 315 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 LY86O95711 162 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 CALCBP10092 127 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 GNRHRP30968 328 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 PRKAR1BP31321 381 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 RAB38P57729 211 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 REEP5Q00765 189 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 EMC4Q5J8M3 183 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 C1orf220Q5T0J3 134 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 FAM162BQ5T6X4 162 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 LIPKQ5VXJ0 399 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 B3GNT9Q6UX72 402 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 RANBP10Q6VN20 620 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 KCTD9Q7L273 389 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 SYT13Q7L8C5 426 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 CLEC14AQ86T13 490 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 ZNF595Q8IYB9 648 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 LAS2Q8IYD9 372 aa7.33□□□□□ -1.24
VPS13D-211ENST00000543710 GTPBP8Q8N3Z3 284 aaPredicted RBP7.33□□□□□ -1.24
VPS13D-211ENST00000543710 OR2T11Q8NH01 316 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 103.6 ms