RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 SPAG4Q9NPE6 437 aa17.58■□□□□ 0.4
DDX55-207ENST00000540763 CMTM6Q9NX76 183 aa17.58■□□□□ 0.4
DDX55-207ENST00000540763 STOML1Q9UBI4 398 aa17.58■□□□□ 0.4
DDX55-207ENST00000540763 RPH3AQ9Y2J0 694 aaPredicted RBP17.58■□□□□ 0.4
DDX55-207ENST00000540763 RELNP78509 3460 aa17.57■□□□□ 0.4
DDX55-207ENST00000540763 SPTAN1Q13813 2472 aaKnown RBP17.57■□□□□ 0.4
DDX55-207ENST00000540763 SPTBN1Q01082 2364 aaKnown RBP17.57■□□□□ 0.4
DDX55-207ENST00000540763 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.57■□□□□ 0.4
DDX55-207ENST00000540763 TRGV8A0A0C4DH27 118 aa17.57■□□□□ 0.4
DDX55-207ENST00000540763 CLEC18AA5D8T8 446 aa17.57■□□□□ 0.4
DDX55-207ENST00000540763 AHRRA9YTQ3 701 aa17.57■□□□□ 0.4
DDX55-207ENST00000540763 E9PLN8 166 aa17.57■□□□□ 0.4
DDX55-207ENST00000540763 GMFGO60234 142 aa17.57■□□□□ 0.4
DDX55-207ENST00000540763 BCAS1O75363 584 aaPredicted RBP17.57■□□□□ 0.4
DDX55-207ENST00000540763 CYP7B1O75881 506 aa17.57■□□□□ 0.4
DDX55-207ENST00000540763 NTN1O95631 604 aa17.57■□□□□ 0.4
DDX55-207ENST00000540763 PEPDP12955 493 aa17.57■□□□□ 0.4
DDX55-207ENST00000540763 UQCRBP14927 111 aa17.57■□□□□ 0.4
DDX55-207ENST00000540763 ZNF708P17019 499 aa17.57■□□□□ 0.4
DDX55-207ENST00000540763 PRKCAP17252 672 aa17.57■□□□□ 0.4
DDX55-207ENST00000540763 PSMA4P25789 261 aaKnown RBP17.57■□□□□ 0.4
DDX55-207ENST00000540763 LHX2P50458 406 aa17.57■□□□□ 0.4
DDX55-207ENST00000540763 RNF144AP50876 292 aaPredicted RBP17.57■□□□□ 0.4
DDX55-207ENST00000540763 SLC7A2P52569 658 aa17.57■□□□□ 0.4
DDX55-207ENST00000540763 EMC4Q5J8M3 183 aa17.57■□□□□ 0.4
DDX55-207ENST00000540763 MTFR2Q6P444 385 aa17.57■□□□□ 0.4
DDX55-207ENST00000540763 CLEC18BQ6UXF7 455 aa17.57■□□□□ 0.4
DDX55-207ENST00000540763 ZNF550Q7Z398 422 aa17.57■□□□□ 0.4
DDX55-207ENST00000540763 HMGN2P46Q86SG4 172 aa17.57■□□□□ 0.4
DDX55-207ENST00000540763 PGAM4Q8N0Y7 254 aa17.57■□□□□ 0.4
DDX55-207ENST00000540763 CLEC18CQ8NCF0 446 aa17.57■□□□□ 0.4
DDX55-207ENST00000540763 OR2T12Q8NG77 320 aa17.57■□□□□ 0.4
DDX55-207ENST00000540763 PHF10Q8WUB8 498 aaKnown RBP17.57■□□□□ 0.4
DDX55-207ENST00000540763 CNOT9Q92600 299 aaKnown RBP17.57■□□□□ 0.4
DDX55-207ENST00000540763 KLHDC3Q9BQ90 382 aa17.57■□□□□ 0.4
DDX55-207ENST00000540763 VKORC1Q9BQB6 163 aa17.57■□□□□ 0.4
DDX55-207ENST00000540763 PNPLA3Q9NST1 481 aa17.57■□□□□ 0.4
DDX55-207ENST00000540763 TINAGQ9UJW2 476 aa17.57■□□□□ 0.4
DDX55-207ENST00000540763 SLC5A6Q9Y289 635 aa17.57■□□□□ 0.4
DDX55-207ENST00000540763 AP4B1Q9Y6B7 739 aa17.57■□□□□ 0.4
DDX55-207ENST00000540763 USP9YO00507 2555 aaPredicted RBP17.57■□□□□ 0.4
DDX55-207ENST00000540763 NCOA6Q14686 2063 aaPredicted RBP17.56■□□□□ 0.4
DDX55-207ENST00000540763 CFAP73A6NFT4 308 aa17.56■□□□□ 0.4
DDX55-207ENST00000540763 NME4O00746 187 aa17.56■□□□□ 0.4
DDX55-207ENST00000540763 MFN2O95140 757 aa17.56■□□□□ 0.4
DDX55-207ENST00000540763 ESRRAP11474 423 aaPredicted RBP17.56■□□□□ 0.4
DDX55-207ENST00000540763 CALB2P22676 271 aa17.56■□□□□ 0.4
DDX55-207ENST00000540763 CPA2P48052 419 aa17.56■□□□□ 0.4
DDX55-207ENST00000540763 PER3P56645 1201 aa17.56■□□□□ 0.4
DDX55-207ENST00000540763 EEFSECP57772 596 aaKnown RBP17.56■□□□□ 0.4
DDX55-207ENST00000540763 PSME3P61289 254 aa17.56■□□□□ 0.4
DDX55-207ENST00000540763 FOXF1Q12946 379 aa17.56■□□□□ 0.4
DDX55-207ENST00000540763 QPRTQ15274 297 aa17.56■□□□□ 0.4
DDX55-207ENST00000540763 DCST1Q5T197 706 aa17.56■□□□□ 0.4
DDX55-207ENST00000540763 C1QL3Q5VWW1 255 aa17.56■□□□□ 0.4
DDX55-207ENST00000540763 TRPM8Q7Z2W7 1104 aa17.56■□□□□ 0.4
DDX55-207ENST00000540763 ARMC8Q8IUR7 673 aa17.56■□□□□ 0.4
DDX55-207ENST00000540763 POC1BQ8TC44 478 aa17.56■□□□□ 0.4
DDX55-207ENST00000540763 RASSF5Q8WWW0 418 aa17.56■□□□□ 0.4
DDX55-207ENST00000540763 WDYHV1Q96HA8 205 aa17.56■□□□□ 0.4
DDX55-207ENST00000540763 PINK1Q9BXM7 581 aa17.56■□□□□ 0.4
DDX55-207ENST00000540763 ALG2Q9H553 416 aa17.56■□□□□ 0.4
DDX55-207ENST00000540763 CHST2Q9Y4C5 530 aa17.56■□□□□ 0.4
DDX55-207ENST00000540763 MED12Q93074 2177 aa17.56■□□□□ 0.4
DDX55-207ENST00000540763 ELOVL7A1L3X0 281 aa17.55■□□□□ 0.4
DDX55-207ENST00000540763 GCM2O75603 506 aaPredicted RBP17.55■□□□□ 0.4
DDX55-207ENST00000540763 GP1BBP13224 206 aa17.55■□□□□ 0.4
DDX55-207ENST00000540763 POU3F2P20265 443 aaPredicted RBP17.55■□□□□ 0.4
DDX55-207ENST00000540763 ACVR2AP27037 513 aa17.55■□□□□ 0.4
DDX55-207ENST00000540763 CLDN18P56856 261 aa17.55■□□□□ 0.4
DDX55-207ENST00000540763 RAC1P63000 192 aa17.55■□□□□ 0.4
DDX55-207ENST00000540763 EPS8Q12929 822 aa17.55■□□□□ 0.4
DDX55-207ENST00000540763 TOMM34Q15785 309 aaPredicted RBP17.55■□□□□ 0.4
DDX55-207ENST00000540763 C16orf89Q6UX73 402 aa17.55■□□□□ 0.4
DDX55-207ENST00000540763 ULK2Q8IYT8 1036 aa17.55■□□□□ 0.4
DDX55-207ENST00000540763 MICU2Q8IYU8 434 aa17.55■□□□□ 0.4
DDX55-207ENST00000540763 FAM26EQ8N5C1 309 aa17.55■□□□□ 0.4
DDX55-207ENST00000540763 ZPLD1Q8TCW7 415 aa17.55■□□□□ 0.4
DDX55-207ENST00000540763 NSL1Q96IY1 281 aa17.55■□□□□ 0.4
DDX55-207ENST00000540763 RNF145Q96MT1 663 aa17.55■□□□□ 0.4
DDX55-207ENST00000540763 ACER3Q9NUN7 267 aa17.55■□□□□ 0.4
DDX55-207ENST00000540763 RLIMQ9NVW2 624 aa17.55■□□□□ 0.4
DDX55-207ENST00000540763 TMEM181Q9P2C4 612 aa17.55■□□□□ 0.4
DDX55-207ENST00000540763 MEMO1Q9Y316 297 aa17.55■□□□□ 0.4
DDX55-207ENST00000540763 ZNF337Q9Y3M9 751 aa17.55■□□□□ 0.4
DDX55-207ENST00000540763 USP9XQ93008 2570 aaPredicted RBP17.55■□□□□ 0.4
DDX55-207ENST00000540763 KIAA1549Q9HCM3 1950 aa17.54■□□□□ 0.4
DDX55-207ENST00000540763 CCT8L1PA6NM43 557 aa17.54■□□□□ 0.4
DDX55-207ENST00000540763 SYT5O00445 386 aa17.54■□□□□ 0.4
DDX55-207ENST00000540763 ZNHIT1O43257 154 aa17.54■□□□□ 0.4
DDX55-207ENST00000540763 C8BP07358 591 aa17.54■□□□□ 0.4
DDX55-207ENST00000540763 AQP1P29972 269 aa17.54■□□□□ 0.4
DDX55-207ENST00000540763 HTR3AP46098 478 aa17.54■□□□□ 0.4
DDX55-207ENST00000540763 LIPEQ05469 1076 aa17.54■□□□□ 0.4
DDX55-207ENST00000540763 SELENBP1Q13228 472 aa17.54■□□□□ 0.4
DDX55-207ENST00000540763 SPATS1Q496A3 300 aa17.54■□□□□ 0.4
DDX55-207ENST00000540763 TMEM211Q6ICI0 200 aa17.54■□□□□ 0.4
DDX55-207ENST00000540763 CLIP4Q8N3C7 705 aa17.54■□□□□ 0.4
DDX55-207ENST00000540763 TNIP2Q8NFZ5 429 aa17.54■□□□□ 0.4
DDX55-207ENST00000540763 OR5M9Q8NGP3 310 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms