RNA–Protein interactions for RNA: ENST00000539952.5

CPSF7-219, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-219ENST00000539952 JSRP1Q96MG2 331 aaPredicted RBP5.43□□□□□ -1.54
CPSF7-219ENST00000539952 TRIB1Q96RU8 372 aa5.43□□□□□ -1.54
CPSF7-219ENST00000539952 SERINC2Q96SA4 455 aa5.43□□□□□ -1.54
CPSF7-219ENST00000539952 CCL19Q99731 98 aa5.43□□□□□ -1.54
CPSF7-219ENST00000539952 TM9SF2Q99805 663 aa5.43□□□□□ -1.54
CPSF7-219ENST00000539952 APOL4Q9BPW4 351 aa5.43□□□□□ -1.54
CPSF7-219ENST00000539952 SFXN3Q9BWM7 321 aa5.43□□□□□ -1.54
CPSF7-219ENST00000539952 OR8D2Q9GZM6 311 aa5.43□□□□□ -1.54
CPSF7-219ENST00000539952 MMP27Q9H306 513 aa5.43□□□□□ -1.54
CPSF7-219ENST00000539952 EHD1Q9H4M9 534 aa5.43□□□□□ -1.54
CPSF7-219ENST00000539952 KLHL31Q9H511 634 aa5.43□□□□□ -1.54
CPSF7-219ENST00000539952 ZNF703Q9H7S9 590 aaPredicted RBP5.43□□□□□ -1.54
CPSF7-219ENST00000539952 PELI2Q9HAT8 420 aa5.43□□□□□ -1.54
CPSF7-219ENST00000539952 PAK1IP1Q9NWT1 392 aaPredicted RBP5.43□□□□□ -1.54
CPSF7-219ENST00000539952 COPS7AQ9UBW8 275 aa5.43□□□□□ -1.54
CPSF7-219ENST00000539952 CAMK2AQ9UQM7 478 aa5.43□□□□□ -1.54
CPSF7-219ENST00000539952 SH2B3Q9UQQ2 575 aa5.43□□□□□ -1.54
CPSF7-219ENST00000539952 MED16Q9Y2X0 877 aa5.43□□□□□ -1.54
CPSF7-219ENST00000539952 CLDN16Q9Y5I7 305 aa5.43□□□□□ -1.54
CPSF7-219ENST00000539952 NPFFR2Q9Y5X5 522 aa5.43□□□□□ -1.54
CPSF7-219ENST00000539952 KCNE2Q9Y6J6 123 aa5.43□□□□□ -1.54
CPSF7-219ENST00000539952 STAB1Q9NY15 2570 aa5.43□□□□□ -1.54
CPSF7-219ENST00000539952 NINQ8N4C6 2090 aa5.43□□□□□ -1.54
CPSF7-219ENST00000539952 TLN2Q9Y4G6 2542 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 PNMA8CA0A1B0GUJ8 204 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 LOC100130705A0A1B0GUX0 176 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 ELOVL7A1L3X0 281 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 LRIT2A6NDA9 550 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 CLDN24A6NM45 220 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 A8MXE2 369 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 C17orf105B2RV13 164 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 SUPT3HB4E1H0 165 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 CYR61O00622 381 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 RGS14O43566 566 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 TPST1O60507 370 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 ZNF354AO60765 605 aaPredicted RBP5.42□□□□□ -1.54
CPSF7-219ENST00000539952 BCAS1O75363 584 aaPredicted RBP5.42□□□□□ -1.54
CPSF7-219ENST00000539952 PRKD3O94806 890 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 WDR47O94967 919 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 ACTL6AO96019 429 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 S100BP04271 92 aaPredicted RBP5.42□□□□□ -1.54
CPSF7-219ENST00000539952 RPS17P08708 135 aaKnown RBP5.42□□□□□ -1.54
CPSF7-219ENST00000539952 LINC00032P0C843 101 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 TMIGD3P0DMS9 266 aaPredicted RBP5.42□□□□□ -1.54
CPSF7-219ENST00000539952 COX7A2P14406 83 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 CPN1P15169 458 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 ZNF37AP17032 561 aaPredicted RBP5.42□□□□□ -1.54
CPSF7-219ENST00000539952 CHMP24386 653 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 GDF1P27539 372 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 PPP2R1BP30154 601 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 SERPINB1P30740 379 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 TRPC1P48995 793 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 PTH2RP49190 550 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 EIF2B2P49770 351 aaKnown RBP5.42□□□□□ -1.54
CPSF7-219ENST00000539952 PLA2G16P53816 162 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 LIM2P55344 173 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 RPP38P78345 283 aaKnown RBP5.42□□□□□ -1.54
CPSF7-219ENST00000539952 ZNF45Q02386 682 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 TGM3Q08188 693 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 FADDQ13158 208 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 PFKFB4Q16877 469 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 TOR1AIP1Q5JTV8 583 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 C6orf136Q5SQH8 315 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 ZNF691Q5VV52 312 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 XAF1Q6GPH4 301 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 ZNF549Q6P9A3 640 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 MSANTD1Q6ZTZ1 278 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 R3HCC1LQ7Z5L2 792 aaKnown RBP5.42□□□□□ -1.54
CPSF7-219ENST00000539952 MILR1Q7Z6M3 343 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 ADCK1Q86TW2 530 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 IGFN1Q86VF2 1251 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 IFNEQ86WN2 208 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 KLHDC8AQ8IYD2 350 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 CPNE9Q8IYJ1 553 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 SPATA6LQ8N4H0 392 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 ZNF441Q8N8Z8 693 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 SRFBP1Q8NEF9 429 aaKnown RBP5.42□□□□□ -1.54
CPSF7-219ENST00000539952 OR9I1Q8NGQ6 314 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 RHOXF1Q8NHV9 184 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 SLC2A12Q8TD20 617 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 ZNF721Q8TF20 911 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 ANKRD49Q8WVL7 239 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 NEIL2Q969S2 332 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 PYCR2Q96C36 320 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 FBXL8Q96CD0 374 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 SPACA9Q96E40 222 aaPredicted RBP5.42□□□□□ -1.54
CPSF7-219ENST00000539952 PERPQ96FX8 193 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 WDYHV1Q96HA8 205 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 SENP5Q96HI0 755 aaPredicted RBP5.42□□□□□ -1.54
CPSF7-219ENST00000539952 FBXL20Q96IG2 436 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 ART5Q96L15 291 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 OR4K3Q96R72 315 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 ZNF382Q96SR6 550 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 SEPHS2Q99611 448 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 DOHHQ9BU89 302 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 FUNDC2Q9BWH2 189 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 ROGDIQ9GZN7 287 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 PITHD1Q9GZP4 211 aaPredicted RBP5.42□□□□□ -1.54
CPSF7-219ENST00000539952 SLC6A15Q9H2J7 730 aa5.42□□□□□ -1.54
CPSF7-219ENST00000539952 NT5DC2Q9H857 520 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 188.3 ms