RNA–Protein interactions for RNA: ENST00000509258.5

RNF4-212, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 893 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-212ENST00000509258 EXOC3L2Q2M3D2 409 aa9.73□□□□□ -0.85
RNF4-212ENST00000509258 SPDYE7PQ495Y7 208 aa9.73□□□□□ -0.85
RNF4-212ENST00000509258 SPANXN4Q5MJ08 99 aa9.73□□□□□ -0.85
RNF4-212ENST00000509258 PDZK1Q5T2W1 519 aa9.73□□□□□ -0.85
RNF4-212ENST00000509258 BEND4Q6ZU67 534 aa9.73□□□□□ -0.85
RNF4-212ENST00000509258 PLEKHM3Q6ZWE6 761 aa9.73□□□□□ -0.85
RNF4-212ENST00000509258 C6orf120Q7Z4R8 191 aa9.73□□□□□ -0.85
RNF4-212ENST00000509258 PRIMA1Q86XR5 153 aa9.73□□□□□ -0.85
RNF4-212ENST00000509258 PPP1R14CQ8TAE6 165 aa9.73□□□□□ -0.85
RNF4-212ENST00000509258 GPR119Q8TDV5 335 aa9.73□□□□□ -0.85
RNF4-212ENST00000509258 ADAMTS15Q8TE58 950 aa9.73□□□□□ -0.85
RNF4-212ENST00000509258 ABHD3Q8WU67 409 aa9.73□□□□□ -0.85
RNF4-212ENST00000509258 TMEM171Q8WVE6 324 aa9.73□□□□□ -0.85
RNF4-212ENST00000509258 RAB8BQ92930 207 aa9.73□□□□□ -0.85
RNF4-212ENST00000509258 ZBTB8AQ96BR9 441 aa9.73□□□□□ -0.85
RNF4-212ENST00000509258 ZG16BQ96DA0 208 aa9.73□□□□□ -0.85
RNF4-212ENST00000509258 REXO5Q96IC2 774 aaKnown RBP9.73□□□□□ -0.85
RNF4-212ENST00000509258 OR10A4Q9H209 315 aa9.73□□□□□ -0.85
RNF4-212ENST00000509258 CENPHQ9H3R5 247 aa9.73□□□□□ -0.85
RNF4-212ENST00000509258 CXorf56Q9H5V9 222 aa9.73□□□□□ -0.85
RNF4-212ENST00000509258 NOP53Q9NZM5 478 aaKnown RBP9.73□□□□□ -0.85
RNF4-212ENST00000509258 RAP2CQ9Y3L5 183 aa9.73□□□□□ -0.85
RNF4-212ENST00000509258 HEATR1Q9H583 2144 aaKnown RBP9.73□□□□□ -0.85
RNF4-212ENST00000509258 STAB1Q9NY15 2570 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 COL6A5A8TX70 2615 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 IGHV3-15A0A0B4J1V0 119 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 RNF103-CHMP3A0A140T963 221 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 A0A1W2PNR3 127 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 ADAM11O75078 769 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 SOX30O94993 753 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 H6PDO95479 791 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 CPSF4O95639 269 aaKnown RBP9.72□□□□□ -0.85
RNF4-212ENST00000509258 PRKCAP17252 672 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 MATN1P21941 496 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 AGTR1P30556 359 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 RPL3P39023 403 aaKnown RBP9.72□□□□□ -0.85
RNF4-212ENST00000509258 CDKN2CP42773 168 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 PTH2RP49190 550 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 RPL14P50914 215 aaKnown RBP9.72□□□□□ -0.85
RNF4-212ENST00000509258 UFM1P61960 85 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 TSC22D1Q15714 1073 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 LSM12Q3MHD2 195 aaKnown RBP9.72□□□□□ -0.85
RNF4-212ENST00000509258 HBMQ6B0K9 141 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 HEPHL1Q6MZM0 1159 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 ESPNLQ6ZVH7 1005 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 NUFIP2Q7Z417 695 aaKnown RBP9.72□□□□□ -0.85
RNF4-212ENST00000509258 MAVSQ7Z434 540 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 LILRA2Q8N149 483 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 ZNF614Q8N883 585 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 ANKRD42Q8N9B4 389 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 ATP6V1C2Q8NEY4 427 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 RFWD2Q8NHY2 731 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 OSTF1Q92882 214 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 SLC35G5Q96KT7 338 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 KLHL15Q96M94 604 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 INPP5KQ9BT40 448 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 QRSL1Q9H0R6 528 aaKnown RBP9.72□□□□□ -0.85
RNF4-212ENST00000509258 OR51I1Q9H343 314 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 KCNK9Q9NPC2 374 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 NGBQ9NPG2 151 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 TIGARQ9NQ88 270 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 ATAD3AQ9NVI7 634 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 ING1Q9UK53 422 aaPredicted RBP9.72□□□□□ -0.85
RNF4-212ENST00000509258 MKLN1Q9UL63 735 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 FAF1Q9UNN5 650 aaPredicted RBP9.72□□□□□ -0.85
RNF4-212ENST00000509258 DTNAQ9Y4J8 743 aa9.72□□□□□ -0.85
RNF4-212ENST00000509258 ALPK2Q86TB3 2170 aa9.71□□□□□ -0.85
RNF4-212ENST00000509258 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.71□□□□□ -0.86
RNF4-212ENST00000509258 CLDN24A6NM45 220 aa9.71□□□□□ -0.86
RNF4-212ENST00000509258 GJE1A6NN92 205 aa9.71□□□□□ -0.86
RNF4-212ENST00000509258 KIAA1324LA8MWY0 1029 aaPredicted RBP9.71□□□□□ -0.86
RNF4-212ENST00000509258 INAFM1C9JVW0 142 aa9.71□□□□□ -0.86
RNF4-212ENST00000509258 RNASET2O00584 256 aaKnown RBP9.71□□□□□ -0.86
RNF4-212ENST00000509258 ZNF195O14628 629 aa9.71□□□□□ -0.86
RNF4-212ENST00000509258 TM9SF1O15321 606 aa9.71□□□□□ -0.86
RNF4-212ENST00000509258 UGT2B17O75795 530 aa9.71□□□□□ -0.86
RNF4-212ENST00000509258 CNOT4O95628 575 aaKnown RBP9.71□□□□□ -0.86
RNF4-212ENST00000509258 PLAUP00749 431 aa9.71□□□□□ -0.86
RNF4-212ENST00000509258 TUBBP07437 444 aa9.71□□□□□ -0.86
RNF4-212ENST00000509258 MYZAPP0CAP1 466 aa9.71□□□□□ -0.86
RNF4-212ENST00000509258 OR12D1P0DN82 309 aa9.71□□□□□ -0.86
RNF4-212ENST00000509258 ATP6V1C1P21283 382 aa9.71□□□□□ -0.86
RNF4-212ENST00000509258 ENPP1P22413 925 aa9.71□□□□□ -0.86
RNF4-212ENST00000509258 EIF1P41567 113 aaKnown RBP9.71□□□□□ -0.86
RNF4-212ENST00000509258 P2RX1P51575 399 aa9.71□□□□□ -0.86
RNF4-212ENST00000509258 STX3Q13277 289 aa9.71□□□□□ -0.86
RNF4-212ENST00000509258 SKP2Q13309 424 aa9.71□□□□□ -0.86
RNF4-212ENST00000509258 CASP8Q14790 479 aa9.71□□□□□ -0.86
RNF4-212ENST00000509258 QPRTQ15274 297 aa9.71□□□□□ -0.86
RNF4-212ENST00000509258 GPR68Q15743 365 aa9.71□□□□□ -0.86
RNF4-212ENST00000509258 ZNF239Q16600 458 aaKnown RBP9.71□□□□□ -0.86
RNF4-212ENST00000509258 SMU1Q2TAY7 513 aa9.71□□□□□ -0.86
RNF4-212ENST00000509258 ARHGAP11BQ3KRB8 267 aa9.71□□□□□ -0.86
RNF4-212ENST00000509258 TMEM201Q5SNT2 666 aa9.71□□□□□ -0.86
RNF4-212ENST00000509258 SAXO2Q658L1 398 aa9.71□□□□□ -0.86
RNF4-212ENST00000509258 TYW3Q6IPR3 259 aaKnown RBP9.71□□□□□ -0.86
RNF4-212ENST00000509258 TNFAIP8L2Q6P589 184 aaPredicted RBP9.71□□□□□ -0.86
RNF4-212ENST00000509258 STAC2Q6ZMT1 411 aa9.71□□□□□ -0.86
RNF4-212ENST00000509258 MTERF4Q7Z6M4 381 aaKnown RBP9.71□□□□□ -0.86
RNF4-212ENST00000509258 ATG4DQ86TL0 474 aaPredicted RBP9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms