RNA–Protein interactions for RNA: ENST00000505553.5

TRAPPC13-208, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,410 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-208ENST00000505553 TRIM69Q86WT6 500 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 LINC01561Q8N1V8 128 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 COMMD1Q8N668 190 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 KIR3DL3Q8N743 410 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 ZNF614Q8N883 585 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 ZNF491Q8N8L2 437 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 HCAR2Q8TDS4 363 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 TRUB1Q8WWH5 349 aaKnown RBP3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 MRPS31Q92665 395 aaKnown RBP3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 FBXO17Q96EF6 278 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 MTMR9Q96QG7 549 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 CLCC1Q96S66 551 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 SLC35A5Q9BS91 424 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 UPF3AQ9H1J1 476 aaKnown RBP3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 PPDPFQ9H3Y8 114 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 IKZF5Q9H5V7 419 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 SMYD3Q9H7B4 428 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 AMBNQ9NP70 447 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 MEPEQ9NQ76 525 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 NANSQ9NR45 359 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 BFARQ9NZS9 450 aa3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 WRAP73Q9P2S5 460 aaPredicted RBP3.18□□□□□ -1.9
TRAPPC13-208ENST00000505553 IGLV4-3A0A075B6K6 122 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 ZNF840PA6NDX5 716 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 FOXI3A8MTJ6 420 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 H3BMQ9 156 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 BOLA2-SMG1P6H3BVE0 249 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 RAMP3O60896 148 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 ZFAND5O76080 213 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 HPP00738 406 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 CST1P01037 141 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 IGHV3-9P01782 118 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 IGHG4P01861 327 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 ATP1B2P14415 290 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 CHMLP26374 656 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 CD1CP29017 333 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 STARP49675 285 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 CRYBB1P53674 252 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 RPS15P62841 145 aaKnown RBP3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 OC90Q02509 493 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 PUDPQ08623 228 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 ZNF154Q13106 437 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 CALCOCO2Q13137 446 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 IL18R1Q13478 541 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 NECTIN1Q15223 517 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 C1orf220Q5T0J3 134 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 FAM182AQ5T1J6 154 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 LIPNQ5VXI9 398 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 PAQR6Q6TCH4 344 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 LRRTM1Q86UE6 522 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 SUMF1Q8NBK3 374 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 AQP11Q8NBQ7 271 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 OR4D9Q8NGE8 314 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 FLVCR1-AS1Q8TAF5 88 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 MAGEE2Q8TD90 523 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 SSC4DQ8WTU2 575 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 DNAJA4Q8WW22 397 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 UBE2E3Q969T4 207 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 HAVCR1Q96D42 359 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 CXorf40BQ96DE9 158 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 NUS1Q96E22 293 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 TIMD4Q96H15 378 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 TMEM80Q96HE8 168 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 SERAC1Q96JX3 654 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 DUX3Q96PT4 197 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 ATF6BQ99941 703 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 DPH7Q9BTV6 452 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 TRIM62Q9BVG3 475 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 ZNF385DQ9H6B1 395 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 AUNIPQ9H7T9 357 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 VCPKMTQ9H867 229 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 NHEJ1Q9H9Q4 299 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 NT5MQ9NPB1 228 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 SENP1Q9P0U3 644 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 TMEM181Q9P2C4 612 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 THAP10Q9P2Z0 257 aaPredicted RBP3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 MRPL11Q9Y3B7 192 aaKnown RBP3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 PEX16Q9Y5Y5 336 aa3.17□□□□□ -1.9
TRAPPC13-208ENST00000505553 NINLQ9Y2I6 1382 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 MROH5Q6ZUA9 1318 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 IGLV7-46A0A075B6I9 117 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 A0A1W2PPE3 182 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 FRG2CA6NGY1 282 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 SAGE2PA6NJ88 616 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 E7ESA3 106 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 NR5A2O00482 541 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 DFNA5O60443 496 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 DNAJB6O75190 326 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 ATP5LO75964 103 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 FTH1P02794 183 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 ZSCAN5DPP0CG00 497 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 TRIM49P0CI25 452 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 TRIM49CP0CI26 452 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 LMO2P25791 158 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 OTX1P32242 354 aaPredicted RBP3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 CD80P33681 288 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 ACVR1BP36896 505 aa3.16□□□□□ -1.9
TRAPPC13-208ENST00000505553 MAP3K8P41279 467 aa3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms