RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 ELK4P28324 431 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 ADH6P28332 368 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 CPOXP36551 454 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 IDH3AP50213 366 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 POLR2JP52435 117 aaKnown RBP11.56□□□□□ -0.56
HDAC1-209ENST00000484305 CHRNEQ04844 493 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 CBFBQ13951 182 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 FGFBP1Q14512 234 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 QPRTQ15274 297 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 SYPL1Q16563 259 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 GPAT3Q53EU6 434 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 HBMQ6B0K9 141 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 ZNF474Q6S9Z5 364 aaPredicted RBP11.56□□□□□ -0.56
HDAC1-209ENST00000484305 DNAJC14Q6Y2X3 702 aaPredicted RBP11.56□□□□□ -0.56
HDAC1-209ENST00000484305 ESPNLQ6ZVH7 1005 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 EIF3MQ7L2H7 374 aaKnown RBP11.56□□□□□ -0.56
HDAC1-209ENST00000484305 CDH24Q86UP0 819 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 ZNF619Q8N2I2 560 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 GOLGA6L1Q8N7Z2 621 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 ANKFN1Q8N957 763 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 ATP6V1C2Q8NEY4 427 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 TOR1AIP2Q8NFQ8 470 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 ZFP90Q8TF47 636 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 NRGNQ92686 78 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 OSTF1Q92882 214 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 VPS33AQ96AX1 596 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 KLHL15Q96M94 604 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 GPATCH1Q9BRR8 931 aaKnown RBP11.56□□□□□ -0.56
HDAC1-209ENST00000484305 THUMPD3Q9BV44 507 aaKnown RBP11.56□□□□□ -0.56
HDAC1-209ENST00000484305 PRRG4Q9BZD6 226 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 QRSL1Q9H0R6 528 aaKnown RBP11.56□□□□□ -0.56
HDAC1-209ENST00000484305 OPN3Q9H1Y3 402 aaPredicted RBP11.56□□□□□ -0.56
HDAC1-209ENST00000484305 TCF7L2Q9NQB0 619 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 POLE3Q9NRF9 147 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 PAQR5Q9NXK6 330 aaPredicted RBP11.56□□□□□ -0.56
HDAC1-209ENST00000484305 ITGB1BP2Q9UKP3 347 aa11.56□□□□□ -0.56
HDAC1-209ENST00000484305 MCTS1Q9ULC4 181 aaKnown RBP11.56□□□□□ -0.56
HDAC1-209ENST00000484305 HRNRQ86YZ3 2850 aaPredicted RBP11.55□□□□□ -0.56
HDAC1-209ENST00000484305 ABCA4P78363 2273 aa11.55□□□□□ -0.56
HDAC1-209ENST00000484305 CLDN24A6NM45 220 aa11.55□□□□□ -0.56
HDAC1-209ENST00000484305 A6NNC1 897 aa11.55□□□□□ -0.56
HDAC1-209ENST00000484305 ETV2O00321 342 aaPredicted RBP11.55□□□□□ -0.56
HDAC1-209ENST00000484305 SASH3O75995 380 aa11.55□□□□□ -0.56
HDAC1-209ENST00000484305 SYNGR4O95473 234 aa11.55□□□□□ -0.56
HDAC1-209ENST00000484305 CHRM4P08173 479 aa11.55□□□□□ -0.56
HDAC1-209ENST00000484305 EPXP11678 715 aa11.55□□□□□ -0.56
HDAC1-209ENST00000484305 PGM1P36871 562 aa11.55□□□□□ -0.56
HDAC1-209ENST00000484305 MVDP53602 400 aa11.55□□□□□ -0.56
HDAC1-209ENST00000484305 CARD18P57730 90 aa11.55□□□□□ -0.56
HDAC1-209ENST00000484305 PPP2R2AP63151 447 aa11.55□□□□□ -0.56
HDAC1-209ENST00000484305 FAM27E3Q08E93 113 aa11.55□□□□□ -0.56
HDAC1-209ENST00000484305 DAZAP2Q15038 168 aaPredicted RBP11.55□□□□□ -0.56
HDAC1-209ENST00000484305 TMEM176BQ3YBM2 270 aaPredicted RBP11.55□□□□□ -0.56
HDAC1-209ENST00000484305 TIGD2Q4W5G0 525 aa11.55□□□□□ -0.56
HDAC1-209ENST00000484305 SLC25A53Q5H9E4 307 aa11.55□□□□□ -0.56
HDAC1-209ENST00000484305 PDSS1Q5T2R2 415 aa11.55□□□□□ -0.56
HDAC1-209ENST00000484305 FAM214BQ7L5A3 538 aa11.55□□□□□ -0.56
HDAC1-209ENST00000484305 MIER2Q8N344 545 aa11.55□□□□□ -0.56
HDAC1-209ENST00000484305 FAM71CQ8NEG0 241 aa11.55□□□□□ -0.56
HDAC1-209ENST00000484305 DYDC1Q8WWB3 177 aa11.55□□□□□ -0.56
HDAC1-209ENST00000484305 MRGPRX4Q96LA9 322 aa11.55□□□□□ -0.56
HDAC1-209ENST00000484305 TRNT1Q96Q11 434 aaKnown RBP11.55□□□□□ -0.56
HDAC1-209ENST00000484305 POLDIP3Q9BY77 421 aaKnown RBP11.55□□□□□ -0.56
HDAC1-209ENST00000484305 SLC38A1Q9H2H9 487 aa11.55□□□□□ -0.56
HDAC1-209ENST00000484305 RASSF1Q9NS23 344 aa11.55□□□□□ -0.56
HDAC1-209ENST00000484305 INTS9Q9NV88 658 aaKnown RBP11.55□□□□□ -0.56
HDAC1-209ENST00000484305 DNAJB12Q9NXW2 375 aaKnown RBP11.55□□□□□ -0.56
HDAC1-209ENST00000484305 CLEC4AQ9UMR7 237 aa11.55□□□□□ -0.56
HDAC1-209ENST00000484305 FAM234BA2RU67 622 aa11.54□□□□□ -0.56
HDAC1-209ENST00000484305 POLR3GO15318 223 aaPredicted RBP11.54□□□□□ -0.56
HDAC1-209ENST00000484305 ANP32DO95626 131 aa11.54□□□□□ -0.56
HDAC1-209ENST00000484305 KRT75O95678 551 aa11.54□□□□□ -0.56
HDAC1-209ENST00000484305 PLGP00747 810 aaPredicted RBP11.54□□□□□ -0.56
HDAC1-209ENST00000484305 ZCCHC18P0CG32 403 aa11.54□□□□□ -0.56
HDAC1-209ENST00000484305 CD8BP10966 210 aa11.54□□□□□ -0.56
HDAC1-209ENST00000484305 NID1P14543 1247 aa11.54□□□□□ -0.56
HDAC1-209ENST00000484305 AQP5P55064 265 aa11.54□□□□□ -0.56
HDAC1-209ENST00000484305 SESN3P58005 492 aa11.54□□□□□ -0.56
HDAC1-209ENST00000484305 KCNJ10P78508 379 aa11.54□□□□□ -0.56
HDAC1-209ENST00000484305 TXNL4AP83876 142 aaKnown RBP11.54□□□□□ -0.56
HDAC1-209ENST00000484305 HPCAP84074 193 aa11.54□□□□□ -0.56
HDAC1-209ENST00000484305 PLAURQ03405 335 aa11.54□□□□□ -0.56
HDAC1-209ENST00000484305 MAPK11Q15759 364 aa11.54□□□□□ -0.56
HDAC1-209ENST00000484305 GTDC1Q4AE62 458 aa11.54□□□□□ -0.56
HDAC1-209ENST00000484305 MSANTD1Q6ZTZ1 278 aa11.54□□□□□ -0.56
HDAC1-209ENST00000484305 ZNF610Q8N9Z0 462 aa11.54□□□□□ -0.56
HDAC1-209ENST00000484305 CKAP2Q8WWK9 683 aa11.54□□□□□ -0.56
HDAC1-209ENST00000484305 OIT3Q8WWZ8 545 aa11.54□□□□□ -0.56
HDAC1-209ENST00000484305 ROBO4Q8WZ75 1007 aa11.54□□□□□ -0.56
HDAC1-209ENST00000484305 AURKBQ96GD4 344 aaPredicted RBP11.54□□□□□ -0.56
HDAC1-209ENST00000484305 MS4A3Q96HJ5 214 aa11.54□□□□□ -0.56
HDAC1-209ENST00000484305 GMPPAQ96IJ6 420 aaPredicted RBP11.54□□□□□ -0.56
HDAC1-209ENST00000484305 ITCHQ96J02 903 aa11.54□□□□□ -0.56
HDAC1-209ENST00000484305 SRXN1Q9BYN0 137 aa11.54□□□□□ -0.56
HDAC1-209ENST00000484305 CLEC4MQ9H2X3 399 aaPredicted RBP11.54□□□□□ -0.56
HDAC1-209ENST00000484305 RMND5AQ9H871 391 aa11.54□□□□□ -0.56
HDAC1-209ENST00000484305 COQ10BQ9H8M1 238 aa11.54□□□□□ -0.56
HDAC1-209ENST00000484305 TPT1P8Q9HAU6 139 aa11.54□□□□□ -0.56
HDAC1-209ENST00000484305 PROCRQ9UNN8 238 aa11.54□□□□□ -0.56
HDAC1-209ENST00000484305 LIPT1Q9Y234 373 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms