RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 YAP1P46937 504 aaKnown RBP8.13□□□□□ -1.11
BRCC3-206ENST00000399042 SUMO3P55854 103 aaPredicted RBP8.13□□□□□ -1.11
BRCC3-206ENST00000399042 DSCR4P56555 118 aaPredicted RBP8.13□□□□□ -1.11
BRCC3-206ENST00000399042 PMP22Q01453 160 aa8.13□□□□□ -1.11
BRCC3-206ENST00000399042 MERTKQ12866 999 aa8.13□□□□□ -1.11
BRCC3-206ENST00000399042 SKP2Q13309 424 aa8.13□□□□□ -1.11
BRCC3-206ENST00000399042 KPNB1Q14974 876 aaKnown RBP8.13□□□□□ -1.11
BRCC3-206ENST00000399042 QPRTQ15274 297 aa8.13□□□□□ -1.11
BRCC3-206ENST00000399042 INPP5JQ15735 1006 aaPredicted RBP8.13□□□□□ -1.11
BRCC3-206ENST00000399042 COLEC12Q5KU26 742 aa8.13□□□□□ -1.11
BRCC3-206ENST00000399042 SLC6A19Q695T7 634 aa8.13□□□□□ -1.11
BRCC3-206ENST00000399042 WBP2NLQ6ICG8 309 aa8.13□□□□□ -1.11
BRCC3-206ENST00000399042 CBLN3Q6UW01 205 aa8.13□□□□□ -1.11
BRCC3-206ENST00000399042 RRM2BQ7LG56 351 aa8.13□□□□□ -1.11
BRCC3-206ENST00000399042 ZNF227Q86WZ6 799 aa8.13□□□□□ -1.11
BRCC3-206ENST00000399042 EXD3Q8N9H8 876 aa8.13□□□□□ -1.11
BRCC3-206ENST00000399042 ATP6V1C2Q8NEY4 427 aa8.13□□□□□ -1.11
BRCC3-206ENST00000399042 OR2M3Q8NG83 312 aa8.13□□□□□ -1.11
BRCC3-206ENST00000399042 UBL7Q96S82 380 aaPredicted RBP8.13□□□□□ -1.11
BRCC3-206ENST00000399042 FNDC11Q9BVV2 318 aa8.13□□□□□ -1.11
BRCC3-206ENST00000399042 TTTY12Q9BZ98 90 aa8.13□□□□□ -1.11
BRCC3-206ENST00000399042 TRIM2Q9C040 744 aa8.13□□□□□ -1.11
BRCC3-206ENST00000399042 DEFB127Q9H1M4 99 aa8.13□□□□□ -1.11
BRCC3-206ENST00000399042 TSPAN10Q9H1Z9 355 aaPredicted RBP8.13□□□□□ -1.11
BRCC3-206ENST00000399042 EXOSC3Q9NQT5 275 aaKnown RBP8.13□□□□□ -1.11
BRCC3-206ENST00000399042 CTPS2Q9NRF8 586 aa8.13□□□□□ -1.11
BRCC3-206ENST00000399042 SERINC1Q9NRX5 453 aa8.13□□□□□ -1.11
BRCC3-206ENST00000399042 DEPPQ9NTK1 212 aa8.13□□□□□ -1.11
BRCC3-206ENST00000399042 OLAHQ9NV23 265 aa8.13□□□□□ -1.11
BRCC3-206ENST00000399042 FBXL2Q9UKC9 423 aa8.13□□□□□ -1.11
BRCC3-206ENST00000399042 C15orf41Q9Y2V0 281 aa8.13□□□□□ -1.11
BRCC3-206ENST00000399042 PCDHGB6Q9Y5F9 930 aa8.13□□□□□ -1.11
BRCC3-206ENST00000399042 MED13Q9UHV7 2174 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 PINLYPA6NC86 204 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 ELOA3DA6NLF2 546 aaPredicted RBP8.12□□□□□ -1.11
BRCC3-206ENST00000399042 NPIPA5E9PKD4 350 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 OIP5O43482 229 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 TPST2O60704 377 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 MT-ND1P03886 318 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 RAP2AP10114 183 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 TFPIP10646 304 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 PRG2P13727 222 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 PTGDSP41222 190 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 EIF1P41567 113 aaKnown RBP8.12□□□□□ -1.11
BRCC3-206ENST00000399042 MAGEA5P43359 124 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 HTR3AP46098 478 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 GAS1P54826 345 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 EPS8Q12929 822 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 NFATC3Q12968 1075 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 GANABQ14697 944 aaKnown RBP8.12□□□□□ -1.11
BRCC3-206ENST00000399042 INAQ16352 499 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 FXNQ16595 210 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.12□□□□□ -1.11
BRCC3-206ENST00000399042 ELOA3BQ3SY89 546 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 FNDC7Q5VTL7 733 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 AP1ARQ63HQ0 302 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 AAGABQ6PD74 315 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 ARSKQ6UWY0 536 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 YRDCQ86U90 279 aaKnown RBP8.12□□□□□ -1.11
BRCC3-206ENST00000399042 RBM45Q8IUH3 476 aaKnown RBP8.12□□□□□ -1.11
BRCC3-206ENST00000399042 GRAMD2AQ8IUY3 354 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 ZDHHC21Q8IVQ6 265 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 FAM109AQ8N4B1 249 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 CISD2Q8N5K1 135 aaKnown RBP8.12□□□□□ -1.11
BRCC3-206ENST00000399042 WDSUB1Q8N9V3 476 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 ELOA3Q8NG57 546 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 GPR32P1Q8NGA4 272 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 OR6T1Q8NGN1 323 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 GPR119Q8TDV5 335 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 CANT1Q8WVQ1 401 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 SMPDL3BQ92485 455 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 SLC35B4Q969S0 331 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 UTP4Q969X6 686 aaKnown RBP8.12□□□□□ -1.11
BRCC3-206ENST00000399042 ARSGQ96EG1 525 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 C1GALT1C1Q96EU7 318 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 SFXN2Q96NB2 322 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 ZNF347Q96SE7 839 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 ARHGDIGQ99819 225 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 PIGQQ9BRB3 760 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 CHID1Q9BWS9 393 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 RTN4RQ9BZR6 473 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 PROK2Q9HC23 129 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 AGPAT4Q9NRZ5 378 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 MED17Q9NVC6 651 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 TESQ9UGI8 421 aaKnown RBP8.12□□□□□ -1.11
BRCC3-206ENST00000399042 TMCC3Q9ULS5 477 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 NPIPA1Q9UND3 350 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 AP4S1Q9Y587 144 aa8.12□□□□□ -1.11
BRCC3-206ENST00000399042 SPIN1Q9Y657 262 aaPredicted RBP8.12□□□□□ -1.11
BRCC3-206ENST00000399042 LRRC3CA6NJW4 275 aa8.11□□□□□ -1.11
BRCC3-206ENST00000399042 SIAH2O43255 324 aa8.11□□□□□ -1.11
BRCC3-206ENST00000399042 BCAS1O75363 584 aaPredicted RBP8.11□□□□□ -1.11
BRCC3-206ENST00000399042 E2F6O75461 281 aa8.11□□□□□ -1.11
BRCC3-206ENST00000399042 BAG2O95816 211 aa8.11□□□□□ -1.11
BRCC3-206ENST00000399042 RFPL3SP0C7P2 107 aa8.11□□□□□ -1.11
BRCC3-206ENST00000399042 SRD5A2P31213 254 aa8.11□□□□□ -1.11
BRCC3-206ENST00000399042 SLC1A3P43003 542 aa8.11□□□□□ -1.11
BRCC3-206ENST00000399042 POLR2HP52434 150 aaKnown RBP8.11□□□□□ -1.11
BRCC3-206ENST00000399042 SESN3P58005 492 aa8.11□□□□□ -1.11
BRCC3-206ENST00000399042 SMIM11AP58511 58 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms