RNA–Protein interactions for RNA: ENST00000334690.10

TRAPPC11-201, Transcript of trafficking protein particle complex 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,552 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-201ENST00000334690 SYNPO2LQ9H987 977 aa15.99■□□□□ 0.15
TRAPPC11-201ENST00000334690 LOXHD1Q8IVV2 1947 aa15.99■□□□□ 0.15
TRAPPC11-201ENST00000334690 H0YGG7 62 aa15.99■□□□□ 0.15
TRAPPC11-201ENST00000334690 MEN1O00255 615 aa15.99■□□□□ 0.15
TRAPPC11-201ENST00000334690 NARSO43776 548 aaKnown RBP15.99■□□□□ 0.15
TRAPPC11-201ENST00000334690 RAB3DO95716 219 aa15.99■□□□□ 0.15
TRAPPC11-201ENST00000334690 IGFBP6P24592 240 aaPredicted RBP15.99■□□□□ 0.15
TRAPPC11-201ENST00000334690 DAP3P51398 398 aaKnown RBP15.99■□□□□ 0.15
TRAPPC11-201ENST00000334690 ARF3P61204 181 aaPredicted RBP15.99■□□□□ 0.15
TRAPPC11-201ENST00000334690 CYCSP99999 105 aaKnown RBP15.99■□□□□ 0.15
TRAPPC11-201ENST00000334690 HENMT1Q5T8I9 393 aaKnown RBP15.99■□□□□ 0.15
TRAPPC11-201ENST00000334690 WBP2NLQ6ICG8 309 aa15.99■□□□□ 0.15
TRAPPC11-201ENST00000334690 TBC1D20Q96BZ9 403 aa15.99■□□□□ 0.15
TRAPPC11-201ENST00000334690 ADOQ96SZ5 270 aa15.99■□□□□ 0.15
TRAPPC11-201ENST00000334690 PRSS16Q9NQE7 514 aa15.99■□□□□ 0.15
TRAPPC11-201ENST00000334690 PRELID1Q9Y255 219 aa15.99■□□□□ 0.15
TRAPPC11-201ENST00000334690 TRAV27A0A087WT01 109 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 LOC105369274A0A096LPK9 316 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 TARM1B6A8C7 271 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 KLK8O60259 260 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 GYPBP06028 91 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 CD34P28906 385 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 HOXA9P31269 272 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 SLC1A3P43003 542 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 TSFMP43897 325 aaKnown RBP15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 PGFP49763 221 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 CHRDL2Q6WN34 429 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 KIF18BQ86Y91 864 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 OR4N4Q8N0Y3 316 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 HDAC8Q9BY41 377 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 ATXN7L1Q9ULK2 861 aaPredicted RBP15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 CBLCQ9ULV8 474 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 RP1L1Q8IWN7 2480 aaPredicted RBP15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 GFYI3L273 518 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 SDC3O75056 442 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 FBXO45P0C2W1 286 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 ISL1P61371 349 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 MRPS21P82921 87 aaKnown RBP15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 EFR3AQ14156 821 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 GPR19Q15760 415 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 GPR137CQ8N3F9 429 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 TM4SF18Q96CE8 201 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 TSNAXQ99598 290 aaKnown RBP15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 INIPQ9NRY2 104 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 GABRPO00591 440 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 ADH6P28332 368 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 EIF2DP41214 584 aaKnown RBP15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 NR4A2P43354 598 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 COX20Q5RI15 118 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 TMEM244Q5VVB8 128 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 TMEM150AQ86TG1 271 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 BORCS8Q96FH0 119 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 AMDHD1Q96NU7 426 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 GLIPR2Q9H4G4 154 aa15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 DIMT1Q9UNQ2 313 aaKnown RBP15.98■□□□□ 0.15
TRAPPC11-201ENST00000334690 SLC5A10A0PJK1 596 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 DIRAS3O95661 229 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 OPRD1P41143 372 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 POU3F4P49335 361 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 GARNL3Q5VVW2 1013 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 BRIX1Q8TDN6 353 aaKnown RBP15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 C16orf58Q96GQ5 468 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 C19orf43Q9BQ61 176 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 SIAEQ9HAT2 523 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 SCN9AQ15858 1988 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 DCDC2BA2VCK2 349 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 TFP02787 698 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 ELAVL4P26378 380 aaKnown RBP15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 GNRHRP30968 328 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 RPS5P46782 204 aaKnown RBP15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 SLX4IPQ5VYV7 408 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 ZNF595Q8IYB9 648 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 LILRA3Q8N6C8 439 aaPredicted RBP15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 GALNT11Q8NCW6 608 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 LSM14AQ8ND56 463 aaKnown RBP15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 SLC25A44Q96H78 314 aaPredicted RBP15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 ANKRD19PQ9H560 264 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 HHLA2Q9UM44 414 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 HEMK1Q9Y5R4 338 aaPredicted RBP15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 COL16A1Q07092 1604 aaPredicted RBP15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 SLC22A5O76082 557 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 PRKAR1BP31321 381 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 ARRB2P32121 409 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 DCAF7P61962 342 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 ZMYND11Q15326 602 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 TSC22D1Q15714 1073 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 RPL22L1Q6P5R6 122 aaKnown RBP15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 SSX6Q7RTT6 188 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 NINJ1Q92982 152 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 TOE1Q96GM8 510 aaKnown RBP15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 COQ10AQ96MF6 247 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 CRB3Q9BUF7 120 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 ZNF850A8MQ14 1090 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 FXYD1O00168 92 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 RFPL3O75679 317 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 P04436 131 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 RAB40ALP0C0E4 278 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 UGT2B7P16662 529 aa15.97■□□□□ 0.15
TRAPPC11-201ENST00000334690 PSMB10P40306 273 aa15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms