RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 MAGEB4O15481 346 aaPredicted RBP11.38□□□□□ -0.59
PCF11-201ENST00000298281 EEDO75530 441 aaKnown RBP11.38□□□□□ -0.59
PCF11-201ENST00000298281 GGT5P36269 586 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 KCNAB2Q13303 367 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 APOFQ13790 326 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 TANGO2Q6ICL3 276 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 HHIPL1Q96JK4 782 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 CCM2LQ9NUG4 571 aaPredicted RBP11.38□□□□□ -0.59
PCF11-201ENST00000298281 LOC102724200A0A096LPH7 203 aaPredicted RBP11.38□□□□□ -0.59
PCF11-201ENST00000298281 FEZF1A0PJY2 475 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 RNF212BA8MTL3 300 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 M0QZ24 198 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 MPIG6BO95866 241 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 OR8U8P0C7N1 319 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 CD46P15529 392 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 GPR4P46093 362 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 DBPQ10586 325 aaPredicted RBP11.38□□□□□ -0.59
PCF11-201ENST00000298281 MOB3CQ70IA8 216 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 NLRC3Q7RTR2 1065 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 KLBQ86Z14 1044 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 EGFL6Q8IUX8 553 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 PRDM9Q9NQV7 894 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 DUSP22Q9NRW4 184 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 COQ3Q9NZJ6 369 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 APOBEC3BQ9UH17 382 aaKnown RBP11.38□□□□□ -0.59
PCF11-201ENST00000298281 STYXL1Q9Y6J8 313 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 GABRR3A8MPY1 467 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 SPP1P10451 314 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 ERVK-25P63136 954 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 SERTAD2Q14140 314 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 TMPRSS11FQ6ZWK6 438 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 OSTM1Q86WC4 334 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 GCNT2Q8N0V5 402 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 OR6C4Q8NGE1 309 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 CREB3L4Q8TEY5 395 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 CLCF1Q9UBD9 225 aa11.38□□□□□ -0.59
PCF11-201ENST00000298281 ZNF230Q9UIE0 474 aaPredicted RBP11.38□□□□□ -0.59
PCF11-201ENST00000298281 BAZ2AQ9UIF9 1905 aaKnown RBP11.37□□□□□ -0.59
PCF11-201ENST00000298281 COCHO43405 550 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 NXPH3O95157 252 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 ASB11Q8WXH4 323 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 SCPEP1Q9HB40 452 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 ACKR4Q9NPB9 350 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 PRDM4Q9UKN5 801 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 TPRP12270 2363 aaKnown RBP11.37□□□□□ -0.59
PCF11-201ENST00000298281 MEIOCA2RUB1 952 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 H7BYZ3 331 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 TAS2R31P59538 309 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 GABARAPL2P60520 117 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 TECRLQ5HYJ1 363 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 SHFQ7M4L6 423 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 CTU1Q7Z7A3 348 aaKnown RBP11.37□□□□□ -0.59
PCF11-201ENST00000298281 HPSE2Q8WWQ2 592 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 ATOH1Q92858 354 aaPredicted RBP11.37□□□□□ -0.59
PCF11-201ENST00000298281 LRRC30A6NM36 301 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 ZNF217O75362 1048 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 RETP07949 1114 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 C5AR1P21730 350 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 KIR2DL3P43628 341 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 PEA15Q15121 130 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 SHISA6Q6ZSJ9 500 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 CYS1Q717R9 158 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 SULF2Q8IWU5 870 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 LPAR4Q99677 370 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 NDFIP1Q9BT67 221 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 CRB3Q9BUF7 120 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 APC2O95996 2303 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 NKX6-3A6NJ46 265 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 ETFAP13804 333 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 SERPINA2P20848 420 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 CTXN1P60606 82 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 PCGF3Q3KNV8 242 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 TXNRD3NBQ6F5E7 133 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 TLDC1Q6P9B6 456 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 OR5AK2Q8NH90 309 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 CORO2AQ92828 525 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 KCNA7Q96RP8 456 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 ACOT13Q9NPJ3 140 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 CDK5RAP2Q96SN8 1893 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 PYCR1P32322 319 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 TBPL1P62380 186 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 HSF1Q00613 529 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 DEFB134Q4QY38 66 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 ZNF687Q8N1G0 1237 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 CHFRQ96EP1 664 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 NMNAT2Q9BZQ4 307 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 ZNF334Q9HCZ1 680 aaPredicted RBP11.37□□□□□ -0.59
PCF11-201ENST00000298281 A0A1W2PP55 124 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 MEIS3P1A6NDR6 274 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 OLFM2O95897 454 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 CLDN8P56748 225 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 OR5I1Q13606 314 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 NR0B2Q15466 257 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 RAB41Q5JT25 222 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 C22orf42Q6IC83 251 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 SERINC2Q96SA4 455 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 MGLLQ99685 303 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 MICU1Q9BPX6 476 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 SLC6A14Q9UN76 642 aa11.37□□□□□ -0.59
PCF11-201ENST00000298281 SEC16AO15027 2179 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms