RNA–Protein interactions for RNA: ENST00000231656.12

CDX1-201, Transcript of caudal type homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDX1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX1-201ENST00000231656 CT45A8P0DMV1 189 aa20.82■□□□□ 0.92
CDX1-201ENST00000231656 CT45A9P0DMV2 189 aa20.82■□□□□ 0.92
CDX1-201ENST00000231656 DRD5P21918 477 aa20.82■□□□□ 0.92
CDX1-201ENST00000231656 TGFBR2P37173 567 aa20.82■□□□□ 0.92
CDX1-201ENST00000231656 PCYT1AP49585 367 aa20.82■□□□□ 0.92
CDX1-201ENST00000231656 EMP2P54851 167 aa20.82■□□□□ 0.92
CDX1-201ENST00000231656 EFNB1P98172 346 aa20.82■□□□□ 0.92
CDX1-201ENST00000231656 OR1Q1Q15612 314 aa20.82■□□□□ 0.92
CDX1-201ENST00000231656 CT45A2Q5DJT8 189 aa20.82■□□□□ 0.92
CDX1-201ENST00000231656 NRMQ8IXM6 262 aa20.82■□□□□ 0.92
CDX1-201ENST00000231656 C16orf52Q8NHV5 167 aa20.82■□□□□ 0.92
CDX1-201ENST00000231656 ARMC7Q9H6L4 198 aa20.82■□□□□ 0.92
CDX1-201ENST00000231656 TVP23BQ9NYZ1 205 aa20.82■□□□□ 0.92
CDX1-201ENST00000231656 DNAJC27Q9NZQ0 273 aa20.82■□□□□ 0.92
CDX1-201ENST00000231656 TESQ9UGI8 421 aaKnown RBP20.82■□□□□ 0.92
CDX1-201ENST00000231656 NXT1Q9UKK6 140 aaKnown RBP20.82■□□□□ 0.92
CDX1-201ENST00000231656 NPIPB9F8W1W9 429 aa20.82■□□□□ 0.92
CDX1-201ENST00000231656 GFRA3O60609 400 aa20.82■□□□□ 0.92
CDX1-201ENST00000231656 ALOX12BO75342 701 aa20.82■□□□□ 0.92
CDX1-201ENST00000231656 NR4A1P22736 598 aa20.82■□□□□ 0.92
CDX1-201ENST00000231656 STAT5AP42229 794 aa20.82■□□□□ 0.92
CDX1-201ENST00000231656 RFX3P48380 749 aa20.82■□□□□ 0.92
CDX1-201ENST00000231656 SMSP52788 366 aa20.82■□□□□ 0.92
CDX1-201ENST00000231656 SLC25A30Q5SVS4 291 aa20.82■□□□□ 0.92
CDX1-201ENST00000231656 PDZK1Q5T2W1 519 aa20.82■□□□□ 0.92
CDX1-201ENST00000231656 C6orf15Q6UXA7 325 aaPredicted RBP20.82■□□□□ 0.92
CDX1-201ENST00000231656 TIPARPQ7Z3E1 657 aaKnown RBP20.82■□□□□ 0.92
CDX1-201ENST00000231656 MARCH9Q86YJ5 346 aa20.82■□□□□ 0.92
CDX1-201ENST00000231656 FAM26EQ8N5C1 309 aa20.82■□□□□ 0.92
CDX1-201ENST00000231656 CNOT9Q92600 299 aaKnown RBP20.82■□□□□ 0.92
CDX1-201ENST00000231656 SENP5Q96HI0 755 aaPredicted RBP20.82■□□□□ 0.92
CDX1-201ENST00000231656 CRB3Q9BUF7 120 aa20.82■□□□□ 0.92
CDX1-201ENST00000231656 CDCA4Q9BXL8 241 aa20.82■□□□□ 0.92
CDX1-201ENST00000231656 PADI1Q9ULC6 663 aa20.82■□□□□ 0.92
CDX1-201ENST00000231656 DYRK3O43781 588 aa20.81■□□□□ 0.92
CDX1-201ENST00000231656 TNFSF15O95150 251 aa20.81■□□□□ 0.92
CDX1-201ENST00000231656 ZNF182P17025 639 aaPredicted RBP20.81■□□□□ 0.92
CDX1-201ENST00000231656 SPCS2Q15005 226 aa20.81■□□□□ 0.92
CDX1-201ENST00000231656 NCF4Q15080 339 aa20.81■□□□□ 0.92
CDX1-201ENST00000231656 WDR88Q6ZMY6 472 aa20.81■□□□□ 0.92
CDX1-201ENST00000231656 ANKRD37Q7Z713 158 aa20.81■□□□□ 0.92
CDX1-201ENST00000231656 GRAMD2AQ8IUY3 354 aa20.81■□□□□ 0.92
CDX1-201ENST00000231656 TEX47Q8TBZ9 253 aa20.81■□□□□ 0.92
CDX1-201ENST00000231656 ITPAQ9BY32 194 aa20.81■□□□□ 0.92
CDX1-201ENST00000231656 Q9N2J8 555 aa20.81■□□□□ 0.92
CDX1-201ENST00000231656 TTC36A6NLP5 189 aa20.8■□□□□ 0.92
CDX1-201ENST00000231656 M0R082 166 aa20.8■□□□□ 0.92
CDX1-201ENST00000231656 ADORA3P0DMS8 318 aa20.8■□□□□ 0.92
CDX1-201ENST00000231656 GPR4P46093 362 aa20.8■□□□□ 0.92
CDX1-201ENST00000231656 ZNF141Q15928 474 aa20.8■□□□□ 0.92
CDX1-201ENST00000231656 PLAG1Q6DJT9 500 aa20.8■□□□□ 0.92
CDX1-201ENST00000231656 P2RY8Q86VZ1 359 aa20.8■□□□□ 0.92
CDX1-201ENST00000231656 OR14A16Q8NHC5 309 aa20.8■□□□□ 0.92
CDX1-201ENST00000231656 C9orf43Q8TAL5 461 aaPredicted RBP20.8■□□□□ 0.92
CDX1-201ENST00000231656 SLC2A12Q8TD20 617 aa20.8■□□□□ 0.92
CDX1-201ENST00000231656 METTL21AQ8WXB1 218 aa20.8■□□□□ 0.92
CDX1-201ENST00000231656 DAZLQ92904 295 aaKnown RBP20.8■□□□□ 0.92
CDX1-201ENST00000231656 MESP1Q9BRJ9 268 aa20.8■□□□□ 0.92
CDX1-201ENST00000231656 ZNF223Q9UK11 482 aaPredicted RBP20.8■□□□□ 0.92
CDX1-201ENST00000231656 KLF7O75840 302 aaPredicted RBP20.8■□□□□ 0.92
CDX1-201ENST00000231656 DDAH2O95865 285 aa20.8■□□□□ 0.92
CDX1-201ENST00000231656 PTHP01270 115 aa20.8■□□□□ 0.92
CDX1-201ENST00000231656 CYC1P08574 325 aa20.8■□□□□ 0.92
CDX1-201ENST00000231656 FAM69BQ5VUD6 431 aa20.8■□□□□ 0.92
CDX1-201ENST00000231656 SLC27A4Q6P1M0 643 aa20.8■□□□□ 0.92
CDX1-201ENST00000231656 ZNF321PQ8N8H1 164 aa20.8■□□□□ 0.92
CDX1-201ENST00000231656 ZSCAN1Q8NBB4 408 aa20.8■□□□□ 0.92
CDX1-201ENST00000231656 OR7G1Q8NGA0 311 aa20.8■□□□□ 0.92
CDX1-201ENST00000231656 ADAMTS14Q8WXS8 1223 aa20.8■□□□□ 0.92
CDX1-201ENST00000231656 ZNF559Q9BR84 538 aa20.8■□□□□ 0.92
CDX1-201ENST00000231656 OR8D2Q9GZM6 311 aa20.8■□□□□ 0.92
CDX1-201ENST00000231656 TLX2O43763 284 aaPredicted RBP20.79■□□□□ 0.92
CDX1-201ENST00000231656 BCL10O95999 233 aa20.79■□□□□ 0.92
CDX1-201ENST00000231656 IGKV3-11P04433 115 aa20.79■□□□□ 0.92
CDX1-201ENST00000231656 SLC37A1P57057 533 aa20.79■□□□□ 0.92
CDX1-201ENST00000231656 MEDAGQ5VYS4 303 aa20.79■□□□□ 0.92
CDX1-201ENST00000231656 BCDIN3DQ7Z5W3 292 aaKnown RBP20.79■□□□□ 0.92
CDX1-201ENST00000231656 ZNF721Q8TF20 911 aa20.79■□□□□ 0.92
CDX1-201ENST00000231656 CRELD1Q96HD1 420 aa20.79■□□□□ 0.92
CDX1-201ENST00000231656 G6PC3Q9BUM1 346 aa20.79■□□□□ 0.92
CDX1-201ENST00000231656 DNAJB12Q9NXW2 375 aaKnown RBP20.79■□□□□ 0.92
CDX1-201ENST00000231656 TAS2R16Q9NYV7 291 aa20.79■□□□□ 0.92
CDX1-201ENST00000231656 IL20Q9NYY1 176 aa20.79■□□□□ 0.92
CDX1-201ENST00000231656 PRODH2Q9UF12 536 aa20.79■□□□□ 0.92
CDX1-201ENST00000231656 CDV3Q9UKY7 258 aaKnown RBP20.79■□□□□ 0.92
CDX1-201ENST00000231656 CBLCQ9ULV8 474 aa20.79■□□□□ 0.92
CDX1-201ENST00000231656 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.79■□□□□ 0.92
CDX1-201ENST00000231656 IGHV3-20A0A0C4DH32 117 aa20.78■□□□□ 0.92
CDX1-201ENST00000231656 LIPAP38571 399 aa20.78■□□□□ 0.92
CDX1-201ENST00000231656 ZNF91Q05481 1191 aa20.78■□□□□ 0.92
CDX1-201ENST00000231656 FGFBP1Q14512 234 aa20.78■□□□□ 0.92
CDX1-201ENST00000231656 NNATQ16517 81 aa20.78■□□□□ 0.92
CDX1-201ENST00000231656 TIGD6Q17RP2 521 aa20.78■□□□□ 0.92
CDX1-201ENST00000231656 SYT14P1Q58G82 188 aa20.78■□□□□ 0.92
CDX1-201ENST00000231656 ZNF613Q6PF04 617 aa20.78■□□□□ 0.92
CDX1-201ENST00000231656 TMEM205Q6UW68 189 aa20.78■□□□□ 0.92
CDX1-201ENST00000231656 RNF113BQ8IZP6 322 aaKnown RBP20.78■□□□□ 0.92
CDX1-201ENST00000231656 BCORP1Q8N888 145 aa20.78■□□□□ 0.92
CDX1-201ENST00000231656 OSTF1Q92882 214 aa20.78■□□□□ 0.92
CDX1-201ENST00000231656 ST6GALNAC1Q9NSC7 600 aaPredicted RBP20.78■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms