RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 NODALQ96S42 347 aa16.64■□□□□ 0.25
VIM-201ENST00000224237 PRRX2Q99811 253 aa16.64■□□□□ 0.25
VIM-201ENST00000224237 ZNF426Q9BUY5 554 aa16.64■□□□□ 0.25
VIM-201ENST00000224237 RBM38Q9H0Z9 239 aaKnown RBP16.64■□□□□ 0.25
VIM-201ENST00000224237 EGLN3Q9H6Z9 239 aa16.64■□□□□ 0.25
VIM-201ENST00000224237 SLC25A19Q9HC21 320 aa16.64■□□□□ 0.25
VIM-201ENST00000224237 PLCXD1Q9NUJ7 323 aa16.64■□□□□ 0.25
VIM-201ENST00000224237 SNX5Q9Y5X3 404 aa16.64■□□□□ 0.25
VIM-201ENST00000224237 MRPS14O60783 128 aaKnown RBP16.63■□□□□ 0.25
VIM-201ENST00000224237 MT-CO3P00414 261 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 HTR1AP08908 422 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 GIPRP48546 466 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 CDK5Q00535 292 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 KIRREL2Q6UWL6 708 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 CDK20Q8IZL9 346 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 CLDN22Q8N7P3 220 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 PFN4Q8NHR9 129 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 SGCDQ92629 289 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 TBL1XR1Q9BZK7 514 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 PLA2G12AQ9BZM1 189 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 DSN1Q9H410 356 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 LIN28AQ9H9Z2 209 aaKnown RBP16.63■□□□□ 0.25
VIM-201ENST00000224237 NPFFR2Q9Y5X5 522 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 CCDC187A0A096LP49 1063 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 ENO4A6NNW6 628 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 PLD2O14939 933 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 PPM1BO75688 479 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 ZFAND5O76080 213 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 IFI30P13284 250 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 PTNP21246 168 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 FOLR3P41439 243 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 CTBP2P56545 445 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 SNRPGP62308 76 aaKnown RBP16.63■□□□□ 0.25
VIM-201ENST00000224237 EFR3AQ14156 821 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 GINS1Q14691 196 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 PCOLCEQ15113 449 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 DESI1Q6ICB0 168 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 SLC27A4Q6P1M0 643 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 ZNF620Q6ZNG0 422 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 PIP4P1Q86T03 277 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 SPARTQ8N0X7 666 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 TMCO5AQ8N6Q1 288 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 OR8J1Q8NGP2 316 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 OSTF1Q92882 214 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 CCNL2Q96S94 520 aaPredicted RBP16.63■□□□□ 0.25
VIM-201ENST00000224237 LAT2Q9GZY6 243 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 IL20Q9NYY1 176 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 PADI1Q9ULC6 663 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 CARD8Q9Y2G2 431 aa16.63■□□□□ 0.25
VIM-201ENST00000224237 SH3D21A4FU49 640 aa16.62■□□□□ 0.25
VIM-201ENST00000224237 M0R129 80 aa16.62■□□□□ 0.25
VIM-201ENST00000224237 KPNA4O00629 521 aaPredicted RBP16.62■□□□□ 0.25
VIM-201ENST00000224237 CDC42EP2O14613 210 aa16.62■□□□□ 0.25
VIM-201ENST00000224237 NDUFB5O43674 189 aa16.62■□□□□ 0.25
VIM-201ENST00000224237 EVI2BP34910 448 aa16.62■□□□□ 0.25
VIM-201ENST00000224237 SLC6A8P48029 635 aa16.62■□□□□ 0.25
VIM-201ENST00000224237 CCR4P51679 360 aa16.62■□□□□ 0.25
VIM-201ENST00000224237 STPG1Q5TH74 334 aa16.62■□□□□ 0.25
VIM-201ENST00000224237 WBP2NLQ6ICG8 309 aa16.62■□□□□ 0.25
VIM-201ENST00000224237 CBLN3Q6UW01 205 aa16.62■□□□□ 0.25
VIM-201ENST00000224237 C6orf15Q6UXA7 325 aaPredicted RBP16.62■□□□□ 0.25
VIM-201ENST00000224237 LINC00114Q6XXX2 140 aa16.62■□□□□ 0.25
VIM-201ENST00000224237 TMPRSS11FQ6ZWK6 438 aa16.62■□□□□ 0.25
VIM-201ENST00000224237 IQCF1Q8N6M8 205 aa16.62■□□□□ 0.25
VIM-201ENST00000224237 THAP3Q8WTV1 239 aaPredicted RBP16.62■□□□□ 0.25
VIM-201ENST00000224237 BPIFA2Q96DR5 249 aa16.62■□□□□ 0.25
VIM-201ENST00000224237 PRRG3Q9BZD7 231 aa16.62■□□□□ 0.25
VIM-201ENST00000224237 ZBTB20Q9HC78 741 aaPredicted RBP16.62■□□□□ 0.25
VIM-201ENST00000224237 C20orf141Q9NUB4 165 aa16.62■□□□□ 0.25
VIM-201ENST00000224237 CLN6Q9NWW5 311 aa16.62■□□□□ 0.25
VIM-201ENST00000224237 PCDHGA3Q9Y5H0 932 aa16.62■□□□□ 0.25
VIM-201ENST00000224237 CDH10Q9Y6N8 788 aa16.62■□□□□ 0.25
VIM-201ENST00000224237 DMXL1Q9Y485 3027 aa16.61■□□□□ 0.25
VIM-201ENST00000224237 ZFHX2Q9C0A1 2572 aaPredicted RBP16.61■□□□□ 0.25
VIM-201ENST00000224237 IGHV1-45A0A0A0MS14 117 aa16.61■□□□□ 0.25
VIM-201ENST00000224237 TMEM200CA6NKL6 621 aa16.61■□□□□ 0.25
VIM-201ENST00000224237 DLGAP3O95886 979 aa16.61■□□□□ 0.25
VIM-201ENST00000224237 CDK4P11802 303 aa16.61■□□□□ 0.25
VIM-201ENST00000224237 TRIP6Q15654 476 aaKnown RBP16.61■□□□□ 0.25
VIM-201ENST00000224237 NEDD8Q15843 81 aa16.61■□□□□ 0.25
VIM-201ENST00000224237 HES3Q5TGS1 186 aa16.61■□□□□ 0.25
VIM-201ENST00000224237 GPR141Q7Z602 305 aa16.61■□□□□ 0.25
VIM-201ENST00000224237 GLRX5Q86SX6 157 aa16.61■□□□□ 0.25
VIM-201ENST00000224237 DEFB124Q8NES8 71 aa16.61■□□□□ 0.25
VIM-201ENST00000224237 Q96MT0 163 aa16.61■□□□□ 0.25
VIM-201ENST00000224237 POLDIP3Q9BY77 421 aaKnown RBP16.61■□□□□ 0.25
VIM-201ENST00000224237 DPH1Q9BZG8 443 aa16.61■□□□□ 0.25
VIM-201ENST00000224237 CCDC90BQ9GZT6 254 aa16.61■□□□□ 0.25
VIM-201ENST00000224237 ZNF700Q9H0M5 742 aa16.61■□□□□ 0.25
VIM-201ENST00000224237 MEPEQ9NQ76 525 aaPredicted RBP16.61■□□□□ 0.25
VIM-201ENST00000224237 TBC1D23Q9NUY8 699 aa16.61■□□□□ 0.25
VIM-201ENST00000224237 ZNF292O60281 2723 aa16.61■□□□□ 0.25
VIM-201ENST00000224237 HEATR5AQ86XA9 2040 aa16.61■□□□□ 0.25
VIM-201ENST00000224237 A0A087WUJ7 227 aa16.61■□□□□ 0.25
VIM-201ENST00000224237 UNC119BA6NIH7 251 aa16.61■□□□□ 0.25
VIM-201ENST00000224237 WWP2O00308 870 aa16.61■□□□□ 0.25
VIM-201ENST00000224237 RGS10O43665 173 aa16.61■□□□□ 0.25
VIM-201ENST00000224237 EIF4E2O60573 245 aaKnown RBP16.61■□□□□ 0.25
VIM-201ENST00000224237 IGHEP01854 428 aa16.61■□□□□ 0.25
VIM-201ENST00000224237 NAGAP17050 411 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms