RNA–Protein interactions for RNA: ENST00000639628.1

HNRNPU-219, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 1 (best) BASIC

Gene HNRNPU, Length 4,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-219ENST00000639628 ALOXE3Q9BYJ1 711 aa8.03□□□□□ -1.12
HNRNPU-219ENST00000639628 POTEKPQ9BYX7 375 aa8.03□□□□□ -1.12
HNRNPU-219ENST00000639628 SDHAF3Q9NRP4 125 aa8.03□□□□□ -1.12
HNRNPU-219ENST00000639628 SERTAD3Q9UJW9 196 aa8.03□□□□□ -1.12
HNRNPU-219ENST00000639628 CYP8B1Q9UNU6 501 aa8.03□□□□□ -1.12
HNRNPU-219ENST00000639628 TRAV27A0A087WT01 109 aa8.02□□□□□ -1.12
HNRNPU-219ENST00000639628 SOX1O00570 391 aaPredicted RBP8.02□□□□□ -1.12
HNRNPU-219ENST00000639628 CDC40O60508 579 aaKnown RBP eCLIP8.02□□□□□ -1.123e-6■□□□□ 8.7
HNRNPU-219ENST00000639628 RDH16O75452 317 aa8.02□□□□□ -1.12
HNRNPU-219ENST00000639628 PGCP20142 388 aa8.02□□□□□ -1.12
HNRNPU-219ENST00000639628 PTBP1P26599 531 aaKnown RBP eCLIP8.02□□□□□ -1.12
HNRNPU-219ENST00000639628 APEX1P27695 318 aaKnown RBP8.02□□□□□ -1.12
HNRNPU-219ENST00000639628 TRIM23P36406 574 aa8.02□□□□□ -1.12
HNRNPU-219ENST00000639628 OPRD1P41143 372 aa8.02□□□□□ -1.12
HNRNPU-219ENST00000639628 FRKP42685 505 aaPredicted RBP8.02□□□□□ -1.12
HNRNPU-219ENST00000639628 SNRPD2P62316 118 aaKnown RBP8.02□□□□□ -1.12
HNRNPU-219ENST00000639628 RAE1P78406 368 aaKnown RBP8.02□□□□□ -1.12
HNRNPU-219ENST00000639628 SCGB2B2Q4G0G5 96 aa8.02□□□□□ -1.12
HNRNPU-219ENST00000639628 KLHL26Q53HC5 615 aa8.02□□□□□ -1.12
HNRNPU-219ENST00000639628 TCTE1Q5JU00 501 aa8.02□□□□□ -1.12
HNRNPU-219ENST00000639628 MFSD12Q6NUT3 480 aa8.02□□□□□ -1.12
HNRNPU-219ENST00000639628 GDF7Q7Z4P5 450 aa8.02□□□□□ -1.12
HNRNPU-219ENST00000639628 OR5AK2Q8NH90 309 aa8.02□□□□□ -1.12
HNRNPU-219ENST00000639628 RELTQ969Z4 430 aa8.02□□□□□ -1.12
HNRNPU-219ENST00000639628 MS4A6EQ96DS6 147 aa8.02□□□□□ -1.12
HNRNPU-219ENST00000639628 OPALINQ96PE5 141 aa8.02□□□□□ -1.12
HNRNPU-219ENST00000639628 PSD2Q9BQI7 771 aa8.02□□□□□ -1.12
HNRNPU-219ENST00000639628 C11orf54Q9H0W9 315 aaPredicted RBP8.02□□□□□ -1.12
HNRNPU-219ENST00000639628 PPIL3Q9H2H8 161 aaKnown RBP8.02□□□□□ -1.12
HNRNPU-219ENST00000639628 OBP2AQ9NY56 170 aa8.02□□□□□ -1.12
HNRNPU-219ENST00000639628 MGAT4CQ9UBM8 478 aa8.02□□□□□ -1.12
HNRNPU-219ENST00000639628 MGAT4AQ9UM21 535 aa8.02□□□□□ -1.12
HNRNPU-219ENST00000639628 A0A087WUU8 490 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 PRRT4C9JH25 899 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 H3BSH0 61 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 PRAF2O60831 178 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 CLEC2LP0C7M8 214 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 GTF2F2P13984 249 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 CCR2P41597 374 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 AP2S1P53680 142 aaPredicted RBP8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 MRPS10P82664 201 aaKnown RBP8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 EXOSC7Q15024 291 aaKnown RBP8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 LTB4RQ15722 352 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.02□□□□□ -1.137e-16■■□□□ 11.7
HNRNPU-219ENST00000639628 ZNF542PQ5EBM4 170 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 SFRP4Q6FHJ7 346 aaPredicted RBP8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 PRICKLE2Q7Z3G6 844 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 TMED4Q7Z7H5 227 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 ZER1Q7Z7L7 766 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 OR6C4Q8NGE1 309 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 OR52R1Q8NGF1 315 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 RBP7Q96R05 134 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 CD93Q9NPY3 652 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 SLC52A3Q9NQ40 469 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 DHDHQ9UQ10 334 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 AK6Q9Y3D8 172 aaKnown RBP8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 PCDHGA3Q9Y5H0 932 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 ZFC3H1O60293 1989 aaKnown RBP8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 TSPAN11A1L157 253 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 CPEP16870 476 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 RORAP35398 523 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 PDX1P52945 283 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 E2F1Q01094 437 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 PLCXD2Q0VAA5 305 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 RASGEF1BQ0VAM2 473 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 CCINQ13939 588 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 GRM7Q14831 915 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 DEFB110Q30KQ9 67 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 FAM69AQ5T7M9 428 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 HES5Q5TA89 166 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 GDPD3Q7L5L3 318 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 INO80EQ8NBZ0 244 aaPredicted RBP8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 SIMC1Q8NDZ2 872 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 LILRB4Q8NHJ6 448 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 OR51J1Q9H342 316 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 FN3KQ9H479 309 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 C8orf33Q9H7E9 229 aaPredicted RBP8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 RANGRFQ9HD47 186 aaPredicted RBP8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 ISYNA1Q9NPH2 558 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 PPIEQ9UNP9 301 aaKnown RBP8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 PIAS3Q9Y6X2 628 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 GON4LQ3T8J9 2241 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 DISC1C4P0D8 188 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 SGK494L7N484 410 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 RP2O75695 350 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 TOXO94900 526 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 CSN2P05814 226 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 NR2C1P13056 603 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 HSD11B1P28845 292 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 OR3A3P47888 321 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 OR3A2P47893 321 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 UBXN2BQ14CS0 331 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 OLIG3Q7RTU3 272 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 TMEM17Q86X19 198 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 ZNF101Q8IZC7 436 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 OR13C2Q8NGS9 318 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 PPP1R14AQ96A00 147 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 NEURL2Q9BR09 285 aa8.02□□□□□ -1.13
HNRNPU-219ENST00000639628 ZNF726A6NNF4 738 aa8.01□□□□□ -1.13
HNRNPU-219ENST00000639628 H0YGG7 62 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms