RNA–Protein interactions for RNA: ENST00000637276.1

CACNA1A-238, Transcript of calcium voltage-gated channel subunit alpha1 A, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1A, Length 7,135 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1A-238	ENST00000637276	HNRNPH3	P31942	346 aa	Known RBP	15.43	■□□□□ 0.06
CACNA1A-238	ENST00000637276	RNLS	Q5VYX0	342 aa		15.43	■□□□□ 0.06
CACNA1A-238	ENST00000637276	LYSMD4	Q5XG99	296 aa		15.43	■□□□□ 0.06
CACNA1A-238	ENST00000637276	SLC46A3	Q7Z3Q1	461 aa		15.43	■□□□□ 0.06
CACNA1A-238	ENST00000637276	CMIP	Q8IY22	773 aa		15.43	■□□□□ 0.06
CACNA1A-238	ENST00000637276	HSD17B11	Q8NBQ5	300 aa		15.43	■□□□□ 0.06
CACNA1A-238	ENST00000637276	FCRL3	Q96P31	734 aa	Predicted RBP	15.43	■□□□□ 0.06
CACNA1A-238	ENST00000637276	TGIF2	Q9GZN2	237 aa		15.43	■□□□□ 0.06
CACNA1A-238	ENST00000637276	EXOSC1	Q9Y3B2	195 aa	Known RBP	15.43	■□□□□ 0.06
CACNA1A-238	ENST00000637276	GJA4	P35212	333 aa		15.43	■□□□□ 0.06
CACNA1A-238	ENST00000637276	GPR50	Q13585	617 aa		15.43	■□□□□ 0.06
CACNA1A-238	ENST00000637276	ZNF829	Q3KNS6	432 aa	Predicted RBP	15.43	■□□□□ 0.06
CACNA1A-238	ENST00000637276	DEFB127	Q9H1M4	99 aa		15.43	■□□□□ 0.06
CACNA1A-238	ENST00000637276	KCND1	Q9NSA2	647 aa		15.43	■□□□□ 0.06
CACNA1A-238	ENST00000637276	ATP23	Q9Y6H3	246 aa		15.43	■□□□□ 0.06
CACNA1A-238	ENST00000637276	GABARAP	H6UMI1	98 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	GABARAP	O95166	117 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	GAA	P10253	952 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	MFSD6L	Q8IWD5	586 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	PEBP4	Q96S96	227 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	HHATL	Q9HCP6	504 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	GALNT9	Q9HCQ5	603 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	LANCL2	Q9NS86	450 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	ASCC3	Q8N3C0	2202 aa	Known RBP	15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	POR	P16435	677 aa	Predicted RBP	15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	MGAT3	Q09327	533 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	HSF5	Q4G112	596 aa	Predicted RBP	15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	CCNJ	Q5T5M9	372 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	BAGE3	Q86Y29	109 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	BAGE2	Q86Y30	109 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	CLDN1	O95832	211 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	IL7	P13232	177 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	NPY1R	P25929	384 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	RPL23A	P62750	156 aa	Known RBP	15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	PAPD4	Q6PIY7	484 aa	Known RBP	15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	GID4	Q8IVV7	300 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	OR5L2	Q8NGL0	311 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	CCDC74A	Q96AQ1	378 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	TSGA13	Q96PP4	275 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	SEMA6C	Q9H3T2	930 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	MED6	O75586	246 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	ATG12	O94817	140 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	RAB3A	P20336	220 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	CSNK1A1	P48729	337 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	TMEM139	Q8IV31	216 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	TUSC5	Q8IXB3	177 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	ZNF419	Q96HQ0	510 aa	Predicted RBP	15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	SGPP1	Q9BX95	441 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	EHF	Q9NZC4	300 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	B3GNT3	Q9Y2A9	372 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	TSPAN11	A1L157	253 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	CST6	Q15828	149 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	NANOGP8	Q6NSW7	305 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	CMTM2	Q8TAZ6	248 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	OR4K3	Q96R72	315 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	ZNF230	Q9UIE0	474 aa	Predicted RBP	15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	PSAT1	Q9Y617	370 aa		15.42	■□□□□ 0.06
CACNA1A-238	ENST00000637276	SLC9B1P1	A6NJY1	282 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	SORBS2	O94875	1100 aa	Known RBP	15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	C8B	P07358	591 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	P2RY2	P41231	377 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	ELL	P55199	621 aa	Predicted RBP	15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	OR8G2P	Q6IF36	304 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	DBX2	Q6ZNG2	339 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	NRM	Q8IXM6	262 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	ZNF296	Q8WUU4	475 aa	Predicted RBP	15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	GHRL	Q9UBU3	117 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	JAG1	P78504	1218 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	PLAUR	Q03405	335 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	TLDC1	Q6P9B6	456 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	PAK1IP1	Q9NWT1	392 aa	Predicted RBP	15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	CA3	P07451	260 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	CLDN17	P56750	224 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	TATDN3	Q17R31	274 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	RBMS3	Q6XE24	437 aa	Known RBP	15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	SYT3	Q9BQG1	590 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	GPR88	Q9GZN0	384 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	OBP2A	Q9NY56	170 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	NLK	Q9UBE8	527 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	MYO5B	Q9ULV0	1848 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	RPS10-NUDT3	A0A1W2PQS6	291 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	RPS10	P46783	165 aa	Known RBP	15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	ANKRD54	Q6NXT1	300 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	SLC27A4	Q6P1M0	643 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	C19orf35	Q6ZS72	473 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	OR9Q2	Q8NGE9	314 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	OCSTAMP	Q9BR26	566 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	IER3IP1	Q9Y5U9	82 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	RFXAP	O00287	272 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	SEC14L2	O76054	403 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	CDK1	P06493	297 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	FCGR2A	P12318	317 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	TAS2R43	P59537	309 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	FLI1	Q01543	452 aa	Predicted RBP	15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	FOXC1	Q12948	553 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	RAB33A	Q14088	237 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	FAM189A2	Q15884	450 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	TAF9	Q16594	264 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	TANGO2	Q6ICL3	276 aa		15.41	■□□□□ 0.06
CACNA1A-238	ENST00000637276	SDHAF2	Q9NX18	166 aa		15.41	■□□□□ 0.06

Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms