RNA–Protein interactions for RNA: ENST00000600718.5

SHKBP1-224, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-224ENST00000600718 ING2Q9H160 280 aa16.21■□□□□ 0.19
SHKBP1-224ENST00000600718 POLR1BQ9H9Y6 1135 aa16.21■□□□□ 0.19
SHKBP1-224ENST00000600718 EXOSC3Q9NQT5 275 aaKnown RBP16.21■□□□□ 0.19
SHKBP1-224ENST00000600718 PCDHGA6Q9Y5G7 932 aa16.21■□□□□ 0.19
SHKBP1-224ENST00000600718 PPM1BO75688 479 aa16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 LYPD3O95274 346 aa16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 UBL4AP11441 157 aa16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 OSMP13725 252 aa16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 EPHA2P29317 976 aa16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 RAPSNQ13702 412 aa16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 PLAG1Q6DJT9 500 aa16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 KIRREL2Q6UWL6 708 aa16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 APOOLQ6UXV4 268 aa16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 MBOAT2Q6ZWT7 520 aa16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 NDUFAF7Q7L592 441 aa16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 RNF113BQ8IZP6 322 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 ZNF786Q8N393 782 aa16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 PIGXQ8TBF5 258 aa16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 PRSS27Q9BQR3 290 aa16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 OCEL1Q9H607 264 aa16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 MYOTQ9UBF9 498 aa16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 REV1Q9UBZ9 1251 aa16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 ALG1L2C9J202 215 aa16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 WWP2O00308 870 aa16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 ZNF264O43296 627 aa16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 GSTM3P21266 225 aa16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 ISL1P61371 349 aa16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 CD226Q15762 336 aa16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 PRICKLE2Q7Z3G6 844 aa16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 ALDH16A1Q8IZ83 802 aa16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 NLGN4XQ8N0W4 816 aa16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 NLGN4YQ8NFZ3 816 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 OR11G2Q8NGC1 345 aa16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 THAP3Q8WTV1 239 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 HS6ST2Q96MM7 605 aa16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 GPR87Q9BY21 358 aa16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 ZBTB20Q9HC78 741 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 KRCC1Q9NPI7 259 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-224ENST00000600718 OTOGLQ3ZCN5 2332 aa16.19■□□□□ 0.18
SHKBP1-224ENST00000600718 A0A0B4J2E0 115 aa16.19■□□□□ 0.18
SHKBP1-224ENST00000600718 A0A1B0GX12 115 aa16.19■□□□□ 0.18
SHKBP1-224ENST00000600718 SOCS6O14544 535 aa16.19■□□□□ 0.18
SHKBP1-224ENST00000600718 ADAM11O75078 769 aa16.19■□□□□ 0.18
SHKBP1-224ENST00000600718 NADKO95544 446 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-224ENST00000600718 CRISP1P54107 249 aa16.19■□□□□ 0.18
SHKBP1-224ENST00000600718 NDUFAF6Q330K2 333 aa16.19■□□□□ 0.18
SHKBP1-224ENST00000600718 DESI1Q6ICB0 168 aa16.19■□□□□ 0.18
SHKBP1-224ENST00000600718 C16orf47Q6ZP98 133 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-224ENST00000600718 SATL1Q86VE3 508 aa16.19■□□□□ 0.18
SHKBP1-224ENST00000600718 SLC15A4Q8N697 577 aa16.19■□□□□ 0.18
SHKBP1-224ENST00000600718 TMEM255BQ8WV15 326 aa16.19■□□□□ 0.18
SHKBP1-224ENST00000600718 NACC2Q96BF6 587 aa16.19■□□□□ 0.18
SHKBP1-224ENST00000600718 TBL1XR1Q9BZK7 514 aa16.19■□□□□ 0.18
SHKBP1-224ENST00000600718 LAT2Q9GZY6 243 aa16.19■□□□□ 0.18
SHKBP1-224ENST00000600718 MMP25Q9NPA2 562 aa16.19■□□□□ 0.18
SHKBP1-224ENST00000600718 RPS6KB2Q9UBS0 482 aa16.19■□□□□ 0.18
SHKBP1-224ENST00000600718 NSG1A0A0A6YYJ2 146 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 A0A1B0GWA3 101 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 C21orf140B9A014 251 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 CHP2O43745 196 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 FADS1O60427 444 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 GGT2P36268 569 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 RPL5P46777 297 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 OMPP47874 163 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 COPZ1P61923 177 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 LSM11P83369 360 aaKnown RBP eCLIP16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 ALDH6A1Q02252 535 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 SKP2Q13309 424 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 ULK3Q6PHR2 472 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 ISLR2Q6UXK2 745 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 GATSQ8NAP1 163 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 POGLUT1Q8NBL1 392 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 SLC22A8Q8TCC7 542 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 FBLIM1Q8WUP2 373 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 MPP4Q96JB8 637 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 NDUFB5O43674 189 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 EIF4E2O60573 245 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 SMIM18P0DKX4 95 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 CHMP24386 653 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 GSSP48637 474 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 NUP107P57740 925 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 IL5RAQ01344 420 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 CD47Q08722 323 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 TSPAN31Q12999 210 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 DNASE1L3Q13609 305 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 KCTD21Q4G0X4 260 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 NUP54Q7Z3B4 507 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 PPP1R32Q7Z5V6 425 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 TMEM239Q8WW34 195 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 TMCO6Q96DC7 493 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 CHCHD3Q9NX63 227 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 SELENONQ9NZV5 590 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 CARD8Q9Y2G2 431 aa16.18■□□□□ 0.18
SHKBP1-224ENST00000600718 TM4SF5O14894 197 aa16.17■□□□□ 0.18
SHKBP1-224ENST00000600718 RAD1O60671 282 aa16.17■□□□□ 0.18
SHKBP1-224ENST00000600718 CEACAM1P13688 526 aa16.17■□□□□ 0.18
SHKBP1-224ENST00000600718 EVI2BP34910 448 aa16.17■□□□□ 0.18
SHKBP1-224ENST00000600718 STAT5AP42229 794 aa16.17■□□□□ 0.18
SHKBP1-224ENST00000600718 SLC6A8P48029 635 aa16.17■□□□□ 0.18
SHKBP1-224ENST00000600718 TMED10P49755 219 aaKnown RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms