RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 ATP6V1C2Q8NEY4 427 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 OR8J2Q8NGG1 315 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 OR2V1Q8NHB1 315 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 FBXO27Q8NI29 283 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 DACH2Q96NX9 599 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 SDF2Q99470 211 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 SLC39A3Q9BRY0 314 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 OR51I1Q9H343 314 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 SERHL2Q9H4I8 314 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 EXD2Q9NVH0 621 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 PAQR5Q9NXK6 330 aaPredicted RBP11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 KLHL28Q9NXS3 571 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 EMC9Q9Y3B6 208 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 DTNAQ9Y4J8 743 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 POLQO75417 2590 aa11.4□□□□□ -0.58
NPLOC4-213ENST00000573519 DOCK7Q96N67 2140 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 A0A0J9YW62 118 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 PRSS51A0A1B0GVH4 220 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 E9PBE3 544 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 ZNF195O14628 629 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 KLF11O14901 512 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 ZNF264O43296 627 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 SCN2BO60939 215 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 STX11O75558 287 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 SASH3O75995 380 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 OR12D1P0DN82 309 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 UBL4AP11441 157 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 UQCRC2P22695 453 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 S100A3P33764 101 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 CD79BP40259 229 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 EIF1P41567 113 aaKnown RBP11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 TOMM34Q15785 309 aaPredicted RBP11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 DPY19L1Q2PZI1 675 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 CTU2Q2VPK5 515 aaKnown RBP11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 FAM174BQ3ZCQ3 159 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 ATAD3BQ5T9A4 648 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 TNFAIP8L2Q6P589 184 aaPredicted RBP11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 ZNF474Q6S9Z5 364 aaPredicted RBP11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 SPNS3Q6ZMD2 512 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 ESPNLQ6ZVH7 1005 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 SPATA19Q7Z5L4 167 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 LRRC34Q8IZ02 419 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 TOR1AIP2Q8NFQ8 470 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 XAGE5Q8WWM1 108 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 NINJ1Q92982 152 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 TESCQ96BS2 214 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 REXO5Q96IC2 774 aaKnown RBP11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 ADGRG7Q96K78 797 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 KLHL15Q96M94 604 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 OR52B2Q96RD2 323 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 MED18Q9BUE0 208 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 SLCO1B3Q9NPD5 702 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 AIG1Q9NVV5 245 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 ELOVL5Q9NYP7 299 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 MKLN1Q9UL63 735 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 ICAM5Q9UMF0 924 aa11.39□□□□□ -0.59
NPLOC4-213ENST00000573519 ANKRD17O75179 2603 aaKnown RBP11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 SERINC4A6NH21 518 aa11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 NPIPB9F8W1W9 429 aa11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 SLCO1B7G3V0H7 640 aa11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 ADAMDEC1O15204 470 aa11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 FCMRO60667 390 aa11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 DIAPH2O60879 1101 aa11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 AK1P00568 194 aa11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 CGAP01215 116 aa11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 CD8BP10966 210 aa11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 ELK4P28324 431 aa11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 SHC1P29353 583 aa11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 UGT2B10P36537 528 aa11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 SUMO3P55854 103 aaPredicted RBP11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 CARD18P57730 90 aa11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 CBFBQ13951 182 aa11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 KEAP1Q14145 624 aa11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 ARHGAP11BQ3KRB8 267 aa11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 CHDHQ8NE62 594 aaPredicted RBP11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 PIWIL2Q8TC59 973 aaKnown RBP11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 GPR119Q8TDV5 335 aa11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 LRRC8CQ8TDW0 803 aa11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 OSTF1Q92882 214 aa11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 RAB8BQ92930 207 aa11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 ZC3HAV1LQ96H79 300 aaKnown RBP11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 GMPPAQ96IJ6 420 aaPredicted RBP11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 WFIKKN1Q96NZ8 548 aa11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 ZBTB18Q99592 522 aa11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 SLC35A5Q9BS91 424 aa11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 KLHL4Q9C0H6 718 aa11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 VIPAS39Q9H9C1 493 aa11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 C6orf203Q9P0P8 240 aaPredicted RBP11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 TESMINQ9Y4I5 508 aa11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 GPR45Q9Y5Y3 372 aa11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 GPC6Q9Y625 555 aaPredicted RBP11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 USH1CQ9Y6N9 552 aa11.38□□□□□ -0.59
NPLOC4-213ENST00000573519 CENPVL1A0A0U1RR11 272 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 GJE1A6NN92 205 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 HMGB1P1B2RPK0 211 aaPredicted RBP11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 C16orf97H3BN30 126 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 EIF4E2O60573 245 aaKnown RBP11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 SS18L1O75177 396 aaPredicted RBP11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 UGT2B17O75795 530 aa11.37□□□□□ -0.59
NPLOC4-213ENST00000573519 GOSR1O95249 250 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms