RNA–Protein interactions for RNA: ENST00000568373.5

SMPD3-211, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-211ENST00000568373 BNC1Q01954 994 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 MED25Q71SY5 747 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 BTLAQ7Z6A9 289 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 D2HGDHQ8N465 521 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 BCORP1Q8N888 145 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 LSMEM1Q8N8F7 131 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 Q8N9G6 341 aaPredicted RBP16.73■□□□□ 0.27
SMPD3-211ENST00000568373 OR7G1Q8NGA0 311 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 OR52L1Q8NGH7 329 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 OR1F2PQ96R84 312 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 YIPF2Q9BWQ6 316 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 MEPEQ9NQ76 525 aaPredicted RBP16.73■□□□□ 0.27
SMPD3-211ENST00000568373 NDUFB11Q9NX14 153 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 CHCHD3Q9NX63 227 aaKnown RBP16.73■□□□□ 0.27
SMPD3-211ENST00000568373 SEMA5BQ9P283 1151 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 CACNA1EQ15878 2313 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 TMEM129A0AVI4 362 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 GPX5O75715 221 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 SLC2A10O95528 541 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 ZNF12P17014 697 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 TBXA2RP21731 343 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 SNAP47Q5SQN1 464 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 NXNL2Q5VZ03 156 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 RPL13AP3Q6NVV1 102 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 ZNF550Q7Z398 422 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 BMP8AQ7Z5Y6 402 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 CMIPQ8IY22 773 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 OR1L3Q8NH93 324 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 ZNF426Q9BUY5 554 aa16.73■□□□□ 0.27
SMPD3-211ENST00000568373 hCG_2014768A0A024R1R8 64 aa16.72■□□□□ 0.27
SMPD3-211ENST00000568373 BHLHE40O14503 412 aa16.72■□□□□ 0.27
SMPD3-211ENST00000568373 RCBTB2O95199 551 aa16.72■□□□□ 0.27
SMPD3-211ENST00000568373 BMP7P18075 431 aa16.72■□□□□ 0.27
SMPD3-211ENST00000568373 WNT4P56705 351 aa16.72■□□□□ 0.27
SMPD3-211ENST00000568373 TMED1Q13445 227 aa16.72■□□□□ 0.27
SMPD3-211ENST00000568373 INAQ16352 499 aa16.72■□□□□ 0.27
SMPD3-211ENST00000568373 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.72■□□□□ 0.27
SMPD3-211ENST00000568373 UBALD2Q8IYN6 164 aa16.72■□□□□ 0.27
SMPD3-211ENST00000568373 PTPMT1Q8WUK0 201 aaPredicted RBP16.72■□□□□ 0.27
SMPD3-211ENST00000568373 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.72■□□□□ 0.27
SMPD3-211ENST00000568373 SENP5Q96HI0 755 aaPredicted RBP16.72■□□□□ 0.27
SMPD3-211ENST00000568373 CDADC1Q9BWV3 514 aa16.72■□□□□ 0.27
SMPD3-211ENST00000568373 NXF2Q9GZY0 626 aaKnown RBP16.72■□□□□ 0.27
SMPD3-211ENST00000568373 DHCR7Q9UBM7 475 aaKnown RBP16.72■□□□□ 0.27
SMPD3-211ENST00000568373 SEC14L4Q9UDX3 406 aa16.72■□□□□ 0.27
SMPD3-211ENST00000568373 EXOSC1Q9Y3B2 195 aaKnown RBP16.72■□□□□ 0.27
SMPD3-211ENST00000568373 RFPL3O75679 317 aa16.71■□□□□ 0.27
SMPD3-211ENST00000568373 MYF5P13349 255 aa16.71■□□□□ 0.27
SMPD3-211ENST00000568373 PSMA1P25786 263 aaKnown RBP16.71■□□□□ 0.27
SMPD3-211ENST00000568373 HTR1FP30939 366 aa16.71■□□□□ 0.27
SMPD3-211ENST00000568373 RBM34P42696 430 aaKnown RBP16.71■□□□□ 0.27
SMPD3-211ENST00000568373 RP1P56715 2156 aa16.71■□□□□ 0.27
SMPD3-211ENST00000568373 ALG10BQ5I7T1 473 aa16.71■□□□□ 0.27
SMPD3-211ENST00000568373 GDPGP1Q6ZNW5 385 aa16.71■□□□□ 0.27
SMPD3-211ENST00000568373 Q6ZNX1 250 aa16.71■□□□□ 0.27
SMPD3-211ENST00000568373 PHC2Q8IXK0 858 aa16.71■□□□□ 0.27
SMPD3-211ENST00000568373 OR9Q1Q8NGQ5 310 aa16.71■□□□□ 0.27
SMPD3-211ENST00000568373 OR13C2Q8NGS9 318 aa16.71■□□□□ 0.27
SMPD3-211ENST00000568373 SLC41A2Q96JW4 573 aa16.71■□□□□ 0.27
SMPD3-211ENST00000568373 ELF4Q99607 663 aaPredicted RBP16.71■□□□□ 0.27
SMPD3-211ENST00000568373 HINT3Q9NQE9 182 aaKnown RBP16.71■□□□□ 0.27
SMPD3-211ENST00000568373 PNO1Q9NRX1 252 aaKnown RBP16.71■□□□□ 0.27
SMPD3-211ENST00000568373 SIGLEC7Q9Y286 467 aa16.71■□□□□ 0.27
SMPD3-211ENST00000568373 SAGP10523 405 aaPredicted RBP16.71■□□□□ 0.27
SMPD3-211ENST00000568373 FOLR1P15328 257 aa16.71■□□□□ 0.27
SMPD3-211ENST00000568373 ITGADQ13349 1161 aa16.71■□□□□ 0.27
SMPD3-211ENST00000568373 SHBQ15464 509 aa16.71■□□□□ 0.27
SMPD3-211ENST00000568373 PRAMEF17Q5VTA0 474 aa16.71■□□□□ 0.27
SMPD3-211ENST00000568373 QSOX2Q6ZRP7 698 aa16.71■□□□□ 0.27
SMPD3-211ENST00000568373 SHFQ7M4L6 423 aa16.71■□□□□ 0.27
SMPD3-211ENST00000568373 PRSS42Q7Z5A4 293 aa16.71■□□□□ 0.27
SMPD3-211ENST00000568373 GPR135Q8IZ08 494 aa16.71■□□□□ 0.27
SMPD3-211ENST00000568373 LNX2Q8N448 690 aa16.71■□□□□ 0.27
SMPD3-211ENST00000568373 ZSCAN1Q8NBB4 408 aa16.71■□□□□ 0.27
SMPD3-211ENST00000568373 BBS1Q8NFJ9 593 aa16.71■□□□□ 0.27
SMPD3-211ENST00000568373 OR4C3Q8NH37 302 aa16.71■□□□□ 0.27
SMPD3-211ENST00000568373 PHOX2BQ99453 314 aa16.71■□□□□ 0.27
SMPD3-211ENST00000568373 ENKD1Q9H0I2 346 aa16.71■□□□□ 0.27
SMPD3-211ENST00000568373 STUB1Q9UNE7 303 aa16.71■□□□□ 0.27
SMPD3-211ENST00000568373 CFL2Q9Y281 166 aa16.71■□□□□ 0.27
SMPD3-211ENST00000568373 IGKV3D-11A0A0A0MRZ8 115 aa16.7■□□□□ 0.26
SMPD3-211ENST00000568373 SERINC4A6NH21 518 aa16.7■□□□□ 0.26
SMPD3-211ENST00000568373 CPEP16870 476 aa16.7■□□□□ 0.26
SMPD3-211ENST00000568373 CRYBB2P43320 205 aa16.7■□□□□ 0.26
SMPD3-211ENST00000568373 ARRB1P49407 418 aaPredicted RBP16.7■□□□□ 0.26
SMPD3-211ENST00000568373 SLC37A1P57057 533 aa16.7■□□□□ 0.26
SMPD3-211ENST00000568373 DSG2Q14126 1118 aa16.7■□□□□ 0.26
SMPD3-211ENST00000568373 OR2G6Q5TZ20 316 aa16.7■□□□□ 0.26
SMPD3-211ENST00000568373 LIPKQ5VXJ0 399 aa16.7■□□□□ 0.26
SMPD3-211ENST00000568373 WDR74Q6RFH5 385 aaPredicted RBP16.7■□□□□ 0.26
SMPD3-211ENST00000568373 SMARCD3Q6STE5 483 aa16.7■□□□□ 0.26
SMPD3-211ENST00000568373 CXXC5Q7LFL8 322 aaKnown RBP16.7■□□□□ 0.26
SMPD3-211ENST00000568373 CPOQ8IVL8 374 aa16.7■□□□□ 0.26
SMPD3-211ENST00000568373 NDC1Q9BTX1 674 aa16.7■□□□□ 0.26
SMPD3-211ENST00000568373 EXOSC4Q9NPD3 245 aaKnown RBP16.7■□□□□ 0.26
SMPD3-211ENST00000568373 H2AFY2Q9P0M6 372 aaPredicted RBP16.7■□□□□ 0.26
SMPD3-211ENST00000568373 EFCAB7A8K855 629 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 A8MU76 341 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 CSTAP01040 98 aa16.69■□□□□ 0.26
SMPD3-211ENST00000568373 MSL3P1P0C860 447 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms