RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 TRUB1Q8WWH5 349 aaKnown RBP12.68□□□□□ -0.38
TPM1-215ENST00000558868 IPCEF1Q8WWN9 437 aaPredicted RBP12.68□□□□□ -0.38
TPM1-215ENST00000558868 OMA1Q96E52 524 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 RNF31Q96EP0 1072 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 ADOQ96SZ5 270 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 PRRG3Q9BZD7 231 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 RYDENQ9NUL5 291 aaKnown RBP12.68□□□□□ -0.38
TPM1-215ENST00000558868 RNF6Q9Y252 685 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 NTNG1Q9Y2I2 539 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 MED31Q9Y3C7 131 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 SNX5Q9Y5X3 404 aa12.68□□□□□ -0.38
TPM1-215ENST00000558868 LOC102723996A0A087X1L8 192 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 A0A0B4J2E0 115 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 IGHV3-20A0A0C4DH32 117 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 A0A1B0GX12 115 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 HTR3EA5X5Y0 456 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 OR6C70A6NIJ9 312 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 ZNF264O43296 627 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 CSO75390 466 aaKnown RBP12.67□□□□□ -0.38
TPM1-215ENST00000558868 LYPD3O95274 346 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 THY1P04216 161 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 ABCD3P28288 659 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 FOLR3P41439 243 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 OMPP47874 163 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 SMSP52788 366 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 CDH15P55291 814 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 SLC26A5P58743 744 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 TMEM164Q5U3C3 297 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 FNDC7Q5VTL7 733 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 C6orf15Q6UXA7 325 aaPredicted RBP12.67□□□□□ -0.38
TPM1-215ENST00000558868 SLCO6A1Q86UG4 719 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 NRMQ8IXM6 262 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 CLDN22Q8N7P3 220 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 GALNT6Q8NCL4 622 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 APCDD1LQ8NCL9 501 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 FAM71CQ8NEG0 241 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 OR2Y1Q8NGV0 311 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 CNIH3Q8TBE1 160 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 TEX47Q8TBZ9 253 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 RNF217Q8TC41 542 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 PHOSPHO1Q8TCT1 267 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 TMEM255BQ8WV15 326 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 OSTF1Q92882 214 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 Q96MT0 163 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 WDR77Q9BQA1 342 aaPredicted RBP12.67□□□□□ -0.38
TPM1-215ENST00000558868 PRSS27Q9BQR3 290 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 PLCXD1Q9NUJ7 323 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 CLN6Q9NWW5 311 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 PADI1Q9ULC6 663 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 PTRH2Q9Y3E5 179 aaKnown RBP12.67□□□□□ -0.38
TPM1-215ENST00000558868 PCDHGA3Q9Y5H0 932 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 GPR179Q6PRD1 2367 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 GVINP1Q7Z2Y8 2422 aa12.67□□□□□ -0.38
TPM1-215ENST00000558868 TRBV11-1A0A0K0K1C0 115 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 A0A1B0GWA3 101 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 SH3D21A4FU49 640 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 ALG1L2C9J202 215 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 EIF4E2O60573 245 aaKnown RBP12.66□□□□□ -0.38
TPM1-215ENST00000558868 FAM20BO75063 409 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 STK17BO94768 372 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 OR6B1O95007 311 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 RAB40ALP0C0E4 278 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 LINGO3P0C6S8 592 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 TTKP33981 857 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 ALDH3B2P48448 385 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 RNF144AP50876 292 aaPredicted RBP12.66□□□□□ -0.38
TPM1-215ENST00000558868 SNRPGP62308 76 aaKnown RBP12.66□□□□□ -0.38
TPM1-215ENST00000558868 PLAURQ03405 335 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 PRKCDQ05655 676 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 EXT1Q16394 746 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 C12orf73Q69YU5 71 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 RPL13AP3Q6NVV1 102 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 Q6ZPB1 254 aaPredicted RBP12.66□□□□□ -0.38
TPM1-215ENST00000558868 PTCHD4Q6ZW05 846 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 GLRX5Q86SX6 157 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 CCDC71Q8IV32 467 aaPredicted RBP12.66□□□□□ -0.38
TPM1-215ENST00000558868 MISPQ8IVT2 679 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 PRR22Q8IZ63 422 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 FAM46AQ96IP4 442 aaKnown RBP12.66□□□□□ -0.38
TPM1-215ENST00000558868 LMF1Q96S06 567 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 TBL1XR1Q9BZK7 514 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 FAM117AQ9C073 453 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 NRSN2Q9GZP1 204 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 LAT2Q9GZY6 243 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 ZNF700Q9H0M5 742 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 SLC25A19Q9HC21 320 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 HHATLQ9HCP6 504 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 RASSF1Q9NS23 344 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 PISDQ9UG56 409 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 NPFFR2Q9Y5X5 522 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 B3GALT1Q9Y5Z6 326 aa12.66□□□□□ -0.38
TPM1-215ENST00000558868 LAMA1P25391 3075 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 CDC14CA4D256 554 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 UNC119BA6NIH7 251 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 PLD2O14939 933 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 KLF4O43474 513 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 GDF9O60383 454 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 ICOSLGO75144 302 aa12.65□□□□□ -0.38
TPM1-215ENST00000558868 BCAS1O75363 584 aaPredicted RBP12.65□□□□□ -0.38
TPM1-215ENST00000558868 PPM1BO75688 479 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms