RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 ALG10BQ5I7T1 473 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 TMEM236Q5W0B7 351 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 WBP2NLQ6ICG8 309 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 SGPP2Q8IWX5 399 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 LSM14AQ8ND56 463 aaKnown RBP7.35□□□□□ -1.23
VPS13D-211ENST00000543710 OR8J2Q8NGG1 315 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 GPR148Q8TDV2 347 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 OR10A5Q9H207 317 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 OR10A2Q9H208 303 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 CSNK1G1Q9HCP0 422 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 SARDHQ9UL12 918 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 ZNF443Q9Y2A4 671 aaPredicted RBP7.35□□□□□ -1.23
VPS13D-211ENST00000543710 ZCWPW2A0A1B0GU75 182 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 FAM171A2A8MVW0 826 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 EEF1E1-BLOC1S5C9J1V9 151 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 SMLR1H3BR10 107 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 PRKACBP22694 351 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 ZNF81P51508 661 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 SLC7A9P82251 487 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 PLA1AQ53H76 456 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 ZNF628Q5EBL2 1059 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 DPY19L3Q6ZPD9 716 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 CMTM1Q8IZ96 169 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 NKAIN3Q8N8D7 197 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 ZNF321PQ8N8H1 164 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 FAM156AQ8NDB6 213 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 ANKK1Q8NFD2 765 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 ZNF566Q969W8 418 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 PRAP1Q96NZ9 151 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 LRFN3Q9BTN0 628 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 CPNE7Q9UBL6 633 aa7.35□□□□□ -1.23
VPS13D-211ENST00000543710 OR6C76A6NM76 312 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 TMEM212A6NML5 194 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 CPNE6O95741 557 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 JUNP05412 331 aaKnown RBP7.34□□□□□ -1.23
VPS13D-211ENST00000543710 GJA4P35212 333 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 MMP12P39900 470 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 CAMLGP49069 296 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 POLR2HP52434 150 aaKnown RBP7.34□□□□□ -1.23
VPS13D-211ENST00000543710 GPLD1P80108 840 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 BCL7AQ4VC05 210 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 FAM78AQ5JUQ0 283 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 AKR1C8PQ5T2L2 129 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 CCDC116Q8IYX3 515 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 ACVR1CQ8NER5 493 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 OR14A16Q8NHC5 309 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 SCAMP5Q8TAC9 235 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 HSPBAP1Q96EW2 488 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 AGAP4Q96P64 663 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 ABCG8Q9H221 673 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 NMNAT1Q9HAN9 279 aaPredicted RBP7.34□□□□□ -1.23
VPS13D-211ENST00000543710 IL21RQ9HBE5 538 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 RNF19AQ9NV58 838 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 ZNF226Q9NYT6 803 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 HIF3AQ9Y2N7 669 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 hCG_1809904A0A1W2PP81 198 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 A0A1W2PPE2 198 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 A0A1W2PR64 198 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 A0A1W2PRV1 198 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 LRIT2A6NDA9 550 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 SIX3O95343 332 aaPredicted RBP7.34□□□□□ -1.23
VPS13D-211ENST00000543710 SCG5P05408 212 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 RFX2P48378 723 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 PRLHRP49683 370 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 RGS19P49795 217 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 KCNQ1P51787 676 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 PRKXP51817 358 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 NTHL1P78549 312 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 TRA2AQ13595 282 aaKnown RBP eCLIP7.34□□□□□ -1.23
VPS13D-211ENST00000543710 CDNFQ49AH0 187 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 CLEC12AQ5QGZ9 265 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 TMPRSS12Q86WS5 348 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 WDTC1Q8N5D0 677 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 OR6N1Q8NGY5 312 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 CNIH3Q8TBE1 160 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 SH3YL1Q96HL8 342 aaPredicted RBP7.34□□□□□ -1.23
VPS13D-211ENST00000543710 ZNF300Q96RE9 604 aaPredicted RBP7.34□□□□□ -1.23
VPS13D-211ENST00000543710 GDF15Q99988 308 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 ZNF700Q9H0M5 742 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 ZBP1Q9H171 429 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 IGLON5A6NGN9 336 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 C12orf71A8MTZ7 269 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 GABRA3P34903 492 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 MSX2P35548 267 aaPredicted RBP7.34□□□□□ -1.23
VPS13D-211ENST00000543710 ZNF133P52736 654 aaPredicted RBP7.34□□□□□ -1.23
VPS13D-211ENST00000543710 NUDT6P53370 316 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 CSRP2Q16527 193 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 SBSNQ6UWP8 590 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 KDM8Q8N371 416 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 OR1J2Q8NGS2 313 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 OR5AK3PQ8NH89 298 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 ABHD5Q8WTS1 349 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 TBC1D20Q96BZ9 403 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 TMEM41AQ96HV5 264 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 TMEM38AQ9H6F2 299 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 KCNJ16Q9NPI9 418 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 H7BY64 318 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 IL2RAP01589 272 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 SELEP16581 610 aa7.34□□□□□ -1.23
VPS13D-211ENST00000543710 TAGLN2P37802 199 aaKnown RBP7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms