RNA–Protein interactions for RNA: ENST00000488908.1

CCDC93-209, Transcript of coiled-coil domain containing 93, humanhuman

TSL 5

Gene CCDC93, Length 268 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-209ENST00000488908 PRMT8Q9NR22 394 aaPredicted RBP0.97□□□□□ -2.25
CCDC93-209ENST00000488908 TEX264Q9Y6I9 313 aa0.97□□□□□ -2.25
CCDC93-209ENST00000488908 RAD54L2Q9Y4B4 1467 aa0.97□□□□□ -2.25
CCDC93-209ENST00000488908 THSD7BQ9C0I4 1608 aa0.97□□□□□ -2.25
CCDC93-209ENST00000488908 SCN2AQ99250 2005 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 A0A1W2PRV1 198 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 HELTA6NFD8 242 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 GJE1A6NN92 205 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 E9PMD0 336 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 SGK494L7N484 410 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 TLR4O00206 839 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 SLC7A4O43246 635 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 NDUFA7O95182 113 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 TNNT3P45378 269 aaPredicted RBP0.96□□□□□ -2.26
CCDC93-209ENST00000488908 PLK1P53350 603 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 RPL8P62917 257 aaKnown RBP0.96□□□□□ -2.26
CCDC93-209ENST00000488908 MYBPC1Q00872 1141 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 BDH1Q02338 343 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 SLC10A7Q0GE19 358 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 CDKN3Q16667 212 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 SLC39A12Q504Y0 691 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 LIPKQ5VXJ0 399 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 PVRIGQ6DKI7 326 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 UNQ9370/PRO34162Q6UXP9 181 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 VRK2Q86Y07 508 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 LINC00304Q8N9R0 145 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 ZNF740Q8NDX6 193 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 DUSP18Q8NEJ0 188 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 OR6X1Q8NH79 312 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 ST7LQ8TDW4 575 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 SLC5A11Q8WWX8 675 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 SLC25A36Q96CQ1 311 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 COQ7Q99807 217 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 CHIAQ9BZP6 476 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 POLR2J2Q9GZM3 115 aaKnown RBP0.96□□□□□ -2.26
CCDC93-209ENST00000488908 COMMD4Q9H0A8 199 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 POLR2J3Q9H1A7 115 aaKnown RBP0.96□□□□□ -2.26
CCDC93-209ENST00000488908 C2orf40Q9H1Z8 148 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 PPDPFQ9H3Y8 114 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 EML4Q9HC35 981 aaKnown RBP0.96□□□□□ -2.26
CCDC93-209ENST00000488908 RBAKQ9NYW8 714 aaPredicted RBP0.96□□□□□ -2.26
CCDC93-209ENST00000488908 HMG20BQ9P0W2 317 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 TRIM10Q9UDY6 481 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 CRLS1Q9UJA2 301 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 UBQLN1Q9UMX0 589 aaKnown RBP0.96□□□□□ -2.26
CCDC93-209ENST00000488908 PLLPQ9Y342 182 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 MAB21L2Q9Y586 359 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 BRWD3Q6RI45 1802 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 PCM1Q15154 2024 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 METP08581 1390 aa0.96□□□□□ -2.26
CCDC93-209ENST00000488908 PPIAL4EA0A075B759 164 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 PPIAL4CA0A0B4J2A2 164 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 TMEM89A2RUT3 159 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 PPIAL4DF5H284 164 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 K7N7A8 449 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 CASKO14936 926 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 BET1O15155 118 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 ZBTB14O43829 449 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 SPAG7O75391 227 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 TGDSO95455 350 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 PLEKP08567 350 aaPredicted RBP0.95□□□□□ -2.26
CCDC93-209ENST00000488908 PPIAL4FP0DN26 164 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 SERPINA2P20848 420 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 COX7A1P24310 79 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 PTPN6P29350 595 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 AQP1P29972 269 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 EPHX2P34913 555 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 HTR5AP47898 357 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 HNRNPFP52597 415 aaKnown RBP0.95□□□□□ -2.26
CCDC93-209ENST00000488908 SH3BGRP55822 239 aaPredicted RBP0.95□□□□□ -2.26
CCDC93-209ENST00000488908 OSTNP61366 133 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 ACTA2P62736 377 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 ACTC1P68032 377 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 CSNK1G2P78368 415 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 CHRNB3Q05901 458 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 HFEQ30201 348 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 CASC10Q5T4H9 136 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 IYDQ6PHW0 289 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 FAM159AQ6UWV7 190 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 FAM220AQ7Z4H9 259 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 NRMQ8IXM6 262 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 NKAIN3Q8N8D7 197 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 OR52I1Q8NGK6 324 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 AENQ8WTP8 325 aaKnown RBP0.95□□□□□ -2.26
CCDC93-209ENST00000488908 FRZBQ92765 325 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 DTD2Q96FN9 168 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 SDSLQ96GA7 329 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 NRIP2Q9BQI9 281 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 OSBPL11Q9BXB4 747 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 TBC1D10AQ9BXI6 508 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 SRXN1Q9BYN0 137 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 MAGT1Q9H0U3 335 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 TPK1Q9H3S4 243 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 SLC25A22Q9H936 323 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 TRPV5Q9NQA5 729 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 GDAP2Q9NXN4 497 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 NDUFA13Q9P0J0 144 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 C6orf203Q9P0P8 240 aaPredicted RBP0.95□□□□□ -2.26
CCDC93-209ENST00000488908 RIMS3Q9UJD0 308 aa0.95□□□□□ -2.26
CCDC93-209ENST00000488908 ASF1AQ9Y294 204 aa0.95□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms