RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 QRSL1Q9H0R6 528 aaKnown RBP11.64□□□□□ -0.55
COL5A1-206ENST00000465877 RABEP2Q9H5N1 569 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 CALHM2Q9HA72 323 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 TMEM45AQ9NWC5 275 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 LIPT1Q9Y234 373 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 AP4B1Q9Y6B7 739 aa11.64□□□□□ -0.55
COL5A1-206ENST00000465877 PKDREJQ9NTG1 2253 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 LRBAP50851 2863 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 NAV2Q8IVL1 2488 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 APCP25054 2843 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 H0YC42 278 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 GTPBP1O00178 669 aaKnown RBP11.63□□□□□ -0.55
COL5A1-206ENST00000465877 DVL2O14641 736 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 EIF4E2O60573 245 aaKnown RBP11.63□□□□□ -0.55
COL5A1-206ENST00000465877 CSTAP01040 98 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 BCHEP06276 602 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 VIMP08670 466 aaKnown RBP11.63□□□□□ -0.55
COL5A1-206ENST00000465877 UBTFL6P0CB48 400 aaPredicted RBP11.63□□□□□ -0.55
COL5A1-206ENST00000465877 NR2F1P10589 423 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 BMP5P22003 454 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 PSMA4P25789 261 aaKnown RBP11.63□□□□□ -0.55
COL5A1-206ENST00000465877 CRATP43155 626 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 SUCLG1P53597 346 aaKnown RBP11.63□□□□□ -0.55
COL5A1-206ENST00000465877 TPD52P55327 224 aaPredicted RBP11.63□□□□□ -0.55
COL5A1-206ENST00000465877 CLDN15P56746 228 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 PLAURQ03405 335 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 FADDQ13158 208 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 CBFBQ13951 182 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 SLC25A35Q3KQZ1 300 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 PAGE3Q5JUK9 113 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 LRRC74BQ6ZQY2 392 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 EIF3MQ7L2H7 374 aaKnown RBP11.63□□□□□ -0.55
COL5A1-206ENST00000465877 LIX1LQ8IVB5 337 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 METTL25Q8N6Q8 603 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 TOR1AIP2Q8NFQ8 470 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 POC1BQ8TC44 478 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 WDR60Q8WVS4 1066 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 ARSGQ96EG1 525 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 UCN2Q96RP3 112 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 TM9SF2Q99805 663 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 TMEM185BQ9H7F4 350 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 KCNJ16Q9NPI9 418 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 SLC52A3Q9NQ40 469 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 NPDC1Q9NQX5 325 aaPredicted RBP11.63□□□□□ -0.55
COL5A1-206ENST00000465877 SLC25A37Q9NYZ2 338 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 SLC35A3Q9Y2D2 325 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 PCDHB14Q9Y5E9 798 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 ANKHD1Q8IWZ3 2542 aaKnown RBP11.63□□□□□ -0.55
COL5A1-206ENST00000465877 ABCA12Q86UK0 2595 aa11.63□□□□□ -0.55
COL5A1-206ENST00000465877 DSPPQ9NZW4 1301 aa11.62□□□□□ -0.55
COL5A1-206ENST00000465877 TACC2O95359 2948 aa11.62□□□□□ -0.55
COL5A1-206ENST00000465877 TRBV5-3A0A0A0MS03 114 aa11.62□□□□□ -0.55
COL5A1-206ENST00000465877 A0A1W2PP18 115 aa11.62□□□□□ -0.55
COL5A1-206ENST00000465877 SLC22A20A6NK97 555 aa11.62□□□□□ -0.55
COL5A1-206ENST00000465877 HNRNPRO43390 633 aaKnown RBP11.62□□□□□ -0.55
COL5A1-206ENST00000465877 CYP7B1O75881 506 aa11.62□□□□□ -0.55
COL5A1-206ENST00000465877 TMIGD3P0DMS9 266 aaPredicted RBP11.62□□□□□ -0.55
COL5A1-206ENST00000465877 CD1EP15812 388 aa11.62□□□□□ -0.55
COL5A1-206ENST00000465877 PRKCAP17252 672 aa11.62□□□□□ -0.55
COL5A1-206ENST00000465877 RPS4Y1P22090 263 aaKnown RBP11.62□□□□□ -0.55
COL5A1-206ENST00000465877 ME2P23368 584 aa11.62□□□□□ -0.55
COL5A1-206ENST00000465877 PGM1P36871 562 aa11.62□□□□□ -0.55
COL5A1-206ENST00000465877 MDH1P40925 334 aaKnown RBP11.62□□□□□ -0.55
COL5A1-206ENST00000465877 EIF1P41567 113 aaKnown RBP11.62□□□□□ -0.55
COL5A1-206ENST00000465877 EEFSECP57772 596 aaKnown RBP11.62□□□□□ -0.55
COL5A1-206ENST00000465877 RPS3AP61247 264 aaKnown RBP11.62□□□□□ -0.55
COL5A1-206ENST00000465877 MAPK11Q15759 364 aa11.62□□□□□ -0.55
COL5A1-206ENST00000465877 TOMM34Q15785 309 aaPredicted RBP11.62□□□□□ -0.55
COL5A1-206ENST00000465877 AP1ARQ63HQ0 302 aa11.62□□□□□ -0.55
COL5A1-206ENST00000465877 MSRB3Q8IXL7 192 aa11.62□□□□□ -0.55
COL5A1-206ENST00000465877 GCNT2Q8N0V5 402 aa11.62□□□□□ -0.55
COL5A1-206ENST00000465877 OR5W2Q8NH69 310 aa11.62□□□□□ -0.55
COL5A1-206ENST00000465877 MARVELD3Q96A59 401 aa11.62□□□□□ -0.55
COL5A1-206ENST00000465877 ZFP3Q96NJ6 502 aa11.62□□□□□ -0.55
COL5A1-206ENST00000465877 PINK1Q9BXM7 581 aa11.62□□□□□ -0.55
COL5A1-206ENST00000465877 LAT2Q9GZY6 243 aa11.62□□□□□ -0.55
COL5A1-206ENST00000465877 RAD21L1Q9H4I0 556 aa11.62□□□□□ -0.55
COL5A1-206ENST00000465877 CALML5Q9NZT1 146 aa11.62□□□□□ -0.55
COL5A1-206ENST00000465877 VAPAQ9P0L0 249 aa11.62□□□□□ -0.55
COL5A1-206ENST00000465877 SLAMF8Q9P0V8 285 aa11.62□□□□□ -0.55
COL5A1-206ENST00000465877 STOML1Q9UBI4 398 aa11.62□□□□□ -0.55
COL5A1-206ENST00000465877 GPC6Q9Y625 555 aaPredicted RBP11.62□□□□□ -0.55
COL5A1-206ENST00000465877 TEX15Q9BXT5 2789 aa11.62□□□□□ -0.55
COL5A1-206ENST00000465877 MPDZO75970 2070 aa11.61□□□□□ -0.55
COL5A1-206ENST00000465877 HRNRQ86YZ3 2850 aaPredicted RBP11.61□□□□□ -0.55
COL5A1-206ENST00000465877 CLDN24A6NM45 220 aa11.61□□□□□ -0.55
COL5A1-206ENST00000465877 CLIC1O00299 241 aa11.61□□□□□ -0.55
COL5A1-206ENST00000465877 EIF1AYO14602 144 aaKnown RBP11.61□□□□□ -0.55
COL5A1-206ENST00000465877 ANGPT2O15123 496 aa11.61□□□□□ -0.55
COL5A1-206ENST00000465877 BCAS1O75363 584 aaPredicted RBP11.61□□□□□ -0.55
COL5A1-206ENST00000465877 TGM6O95932 706 aa11.61□□□□□ -0.55
COL5A1-206ENST00000465877 SNRPB2P08579 225 aaKnown RBP11.61□□□□□ -0.55
COL5A1-206ENST00000465877 BMP2P12643 396 aa11.61□□□□□ -0.55
COL5A1-206ENST00000465877 COX6B1P14854 86 aa11.61□□□□□ -0.55
COL5A1-206ENST00000465877 IL11P20809 199 aa11.61□□□□□ -0.55
COL5A1-206ENST00000465877 ADH6P28332 368 aa11.61□□□□□ -0.55
COL5A1-206ENST00000465877 ASCL1P50553 236 aa11.61□□□□□ -0.55
COL5A1-206ENST00000465877 ARFIP2P53365 341 aa11.61□□□□□ -0.55
COL5A1-206ENST00000465877 CRISP3P54108 245 aa11.61□□□□□ -0.55
COL5A1-206ENST00000465877 SF3A3Q12874 501 aaKnown RBP eCLIP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms