RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 ACTR3BQ9P1U1 418 aa4□□□□□ -1.77
HMGB1P16-201ENST00000447155 CACNG4Q9UBN1 327 aa4□□□□□ -1.77
HMGB1P16-201ENST00000447155 TRMT112Q9UI30 125 aaKnown RBP4□□□□□ -1.77
HMGB1P16-201ENST00000447155 WDR83OSQ9Y284 106 aa4□□□□□ -1.77
HMGB1P16-201ENST00000447155 NAALAD2Q9Y3Q0 740 aa4□□□□□ -1.77
HMGB1P16-201ENST00000447155 TMED3Q9Y3Q3 217 aa4□□□□□ -1.77
HMGB1P16-201ENST00000447155 MTF2Q9Y483 593 aaPredicted RBP4□□□□□ -1.77
HMGB1P16-201ENST00000447155 ZNF646O15015 1829 aaPredicted RBP4□□□□□ -1.77
HMGB1P16-201ENST00000447155 MIA3Q5JRA6 1907 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 MICAL3Q7RTP6 2002 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 EFCAB10A6NFE3 127 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 ANKRD61A6NGH8 418 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 CASTOR2A6NHX0 329 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 A8MU76 341 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 I3L521 148 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 hCG_2039718K7EN88 272 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 UBXN8O00124 270 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 BMPR1BO00238 502 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 SLC1A7O00341 560 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 P2RY10O00398 339 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 CST8O60676 142 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 BANF1O75531 89 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 SORBS2O94875 1100 aaKnown RBP3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 SEMA3DO95025 777 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 SNAP29O95721 258 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 TSHBP01222 138 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 TNNC2P02585 160 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 C1QBP02746 253 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 MLNP12872 115 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 RAB3AP20336 220 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 EFNA1P20827 205 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 ZP3P21754 424 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 PSMA2P25787 234 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 PSMB9P28065 219 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 RPL22P35268 128 aaKnown RBP3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 UGT2B10P36537 528 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 ETV6P41212 452 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 MAGEA6P43360 314 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 MAGEA11P43364 429 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 ATP5OP48047 213 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 GCLMP48507 274 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 SLC7A2P52569 658 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 CLDN15P56746 228 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 SSTP61278 116 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 DYNLT1P63172 113 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 CSNK2BP67870 215 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 ZNF33BQ06732 778 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 RGS1Q08116 209 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 INCA1Q0VD86 236 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 FADDQ13158 208 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 MAB21L1Q13394 359 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 QPRTQ15274 297 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 TAF13Q15543 124 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 STK11Q15831 433 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 CYBRD1Q53TN4 286 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 PAGE2BQ5JRK9 111 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 SPANXN3Q5MJ09 141 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 ANKRD22Q5VYY1 191 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 STEAP4Q687X5 459 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 CASC4Q6P4E1 433 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 SLC27A1Q6PCB7 646 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 CDHR3Q6ZTQ4 885 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 SMIM29Q86T20 159 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 TRIM69Q86WT6 500 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 STX12Q86Y82 276 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 C10orf107Q8IVU9 208 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 UBQLNLQ8IYU4 475 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 CDK20Q8IZL9 346 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 EID3Q8N140 333 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 RNF148Q8N7C7 305 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 ZNF781Q8N8C0 355 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 MAPKAPK5-AS1Q8N8E1 139 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 RASGEF1AQ8N9B8 481 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 LMNTD1Q8N9Z9 388 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 ATAD1Q8NBU5 361 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 TMEM35BQ8NCS4 154 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 KLHDC9Q8NEP7 349 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 OR7G3Q8NG95 312 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 SPATA18Q8TC71 538 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 DYNC2LI1Q8TCX1 351 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 PHLDA1Q8WV24 401 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 KCTD4Q8WVF5 259 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 CORO2AQ92828 525 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 UFD1Q92890 307 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 RPL3LQ92901 407 aaKnown RBP3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 MR1Q95460 341 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 ARL5BQ96KC2 179 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 FAM71F1Q96KD3 344 aaPredicted RBP3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 MCEEQ96PE7 176 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 PCDHB18PQ96TA0 734 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 EBNA1BP2Q99848 306 aaKnown RBP3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 FEM1AQ9BSK4 669 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 ZNF416Q9BWM5 594 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 TEKT3Q9BXF9 490 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 FTHL17Q9BXU8 183 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 CCDC90BQ9GZT6 254 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 NAA50Q9GZZ1 169 aaKnown RBP3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 DCSTAMPQ9H295 470 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 ZNF385DQ9H6B1 395 aa3.99□□□□□ -1.77
HMGB1P16-201ENST00000447155 TRPV4Q9HBA0 871 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms