RNA–Protein interactions for RNA: ENST00000442461.6

LIN54-202, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best) BASIC

Gene LIN54, Length 4,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-202ENST00000442461 SPATA31A7Q8IWB4 1347 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 SNRPGP15A8MWD9 76 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 IGFALSP35858 605 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 HERV-K104P61576 105 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 PLA2G7Q13093 441 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 TOMM20Q15388 145 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 P2RY14Q15391 338 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 FKBP1CQ5VVH2 108 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 UNC5DQ6UXZ4 953 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 Q6ZSR9 355 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 NRMQ8IXM6 262 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 DUSP18Q8NEJ0 188 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 OR5T1Q8NG75 326 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 TMED6Q8WW62 240 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 SAMD8Q96LT4 415 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 GPR20Q99678 358 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 CNIH4Q9P003 139 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 ZNF230Q9UIE0 474 aaPredicted RBP9.71□□□□□ -0.85
LIN54-202ENST00000442461 BACE2Q9Y5Z0 518 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 ARID1AO14497 2285 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 FAM208AQ9UK61 1670 aaKnown RBP9.71□□□□□ -0.85
LIN54-202ENST00000442461 TMEM129A0AVI4 362 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 PTP4A3O75365 173 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 HNF1AP20823 631 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 PCMT1P22061 227 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 ACVRL1P37023 503 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 MAP4K2Q12851 820 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 SF1Q15637 639 aaKnown RBP9.71□□□□□ -0.85
LIN54-202ENST00000442461 PRSS36Q5K4E3 855 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 B3GNT9Q6UX72 402 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 SCAMP5Q8TAC9 235 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 UROC1Q96N76 676 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 TINAGL1Q9GZM7 467 aaPredicted RBP9.71□□□□□ -0.85
LIN54-202ENST00000442461 PRO1933Q9H354 126 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 SPACA1Q9HBV2 294 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 DCAF16Q9NXF7 216 aa9.71□□□□□ -0.85
LIN54-202ENST00000442461 SNED1Q8TER0 1413 aa9.71□□□□□ -0.86
LIN54-202ENST00000442461 MEGF11A6BM72 1044 aa9.71□□□□□ -0.86
LIN54-202ENST00000442461 OR5K3A6NET4 321 aa9.71□□□□□ -0.86
LIN54-202ENST00000442461 RHOP08100 348 aa9.71□□□□□ -0.86
LIN54-202ENST00000442461 IRF5Q13568 498 aa9.71□□□□□ -0.86
LIN54-202ENST00000442461 C18orf21Q32NC0 220 aaPredicted RBP9.71□□□□□ -0.86
LIN54-202ENST00000442461 SPIN3Q5JUX0 258 aa9.71□□□□□ -0.86
LIN54-202ENST00000442461 TMEM71Q6P5X7 295 aa9.71□□□□□ -0.86
LIN54-202ENST00000442461 KCTD18Q6PI47 426 aaPredicted RBP9.71□□□□□ -0.86
LIN54-202ENST00000442461 TMEM220Q6QAJ8 160 aa9.71□□□□□ -0.86
LIN54-202ENST00000442461 STPG2Q8N412 459 aa9.71□□□□□ -0.86
LIN54-202ENST00000442461 ZNF709Q8N972 641 aa9.71□□□□□ -0.86
LIN54-202ENST00000442461 OR1J1Q8NGS3 322 aa9.71□□□□□ -0.86
LIN54-202ENST00000442461 FNDC9Q8TBE3 224 aa9.71□□□□□ -0.86
LIN54-202ENST00000442461 TMEM169Q96HH4 297 aa9.71□□□□□ -0.86
LIN54-202ENST00000442461 C4orf36Q96KX1 117 aa9.71□□□□□ -0.86
LIN54-202ENST00000442461 ELF4Q99607 663 aaPredicted RBP9.71□□□□□ -0.86
LIN54-202ENST00000442461 SLC25A21Q9BQT8 299 aaPredicted RBP9.71□□□□□ -0.86
LIN54-202ENST00000442461 TAPBPLQ9BX59 468 aa9.71□□□□□ -0.86
LIN54-202ENST00000442461 TREX1Q9NSU2 369 aa9.71□□□□□ -0.86
LIN54-202ENST00000442461 EXO1Q9UQ84 846 aaKnown RBP9.71□□□□□ -0.86
LIN54-202ENST00000442461 MRPS33Q9Y291 106 aaKnown RBP9.71□□□□□ -0.86
LIN54-202ENST00000442461 ZFP37Q9Y6Q3 630 aaPredicted RBP9.71□□□□□ -0.86
LIN54-202ENST00000442461 M0R3H8 397 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 DSCR3O14972 297 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 SRPX2O60687 465 aaPredicted RBP9.7□□□□□ -0.86
LIN54-202ENST00000442461 MCCD1P59942 119 aaPredicted RBP9.7□□□□□ -0.86
LIN54-202ENST00000442461 HYAL2Q12891 473 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 P4HA3Q7Z4N8 544 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 PHYKPLQ8IUZ5 450 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 SEMA6DQ8NFY4 1073 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 OR5AK2Q8NH90 309 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 GPR152Q8TDT2 470 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 RERGQ96A58 199 aaPredicted RBP9.7□□□□□ -0.86
LIN54-202ENST00000442461 ZNF587Q96SQ5 575 aaPredicted RBP9.7□□□□□ -0.86
LIN54-202ENST00000442461 PITX2Q99697 317 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 GABARAPL3Q9BY60 117 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 ZDHHC5Q9C0B5 715 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 DLL4Q9NR61 685 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 CPNE7Q9UBL6 633 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 FCF1Q9Y324 198 aaKnown RBP9.7□□□□□ -0.86
LIN54-202ENST00000442461 C1orf167Q5SNV9 1468 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 CDHR4A6H8M9 788 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 HSBP1L1C9JCN9 74 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 GABARAPH6UMI1 98 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 AP4M1O00189 453 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 ADH1CP00326 375 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 EGFP01133 1207 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 KCNJ3P48549 501 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 CAV2P51636 162 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 DGCR2P98153 550 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 CTBSQ01459 385 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 EBPQ15125 230 aaKnown RBP9.7□□□□□ -0.86
LIN54-202ENST00000442461 PRAMEF14Q5SWL7 426 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 PSAPL1Q6NUJ1 521 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 FAM180BQ6P0A1 224 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 LRFN4Q6PJG9 635 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 ABHD13Q7L211 337 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 BAP18Q8IXM2 172 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 C1orf87Q8N0U7 546 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 OR1J2Q8NGS2 313 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 ECHDC3Q96DC8 303 aa9.7□□□□□ -0.86
LIN54-202ENST00000442461 PGAP3Q96FM1 320 aaPredicted RBP9.7□□□□□ -0.86
LIN54-202ENST00000442461 MEGF10Q96KG7 1140 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms