RNA–Protein interactions for RNA: ENST00000441799.1

HMGB3P9-201, Transcript of high mobility group box 3 pseudogene 9, humanhuman

BASIC

Gene HMGB3P9, Length 583 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P9-201ENST00000441799 GLUD2P49448 558 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 BLKP51451 505 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 NUDT6P53370 316 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 TAS2R39P59534 338 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 RAP1AP62834 184 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 HERVK_113P63132 956 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 MRPS21P82921 87 aaKnown RBP4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 E2F1Q01094 437 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 RBBP4Q09028 425 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 SCAPQ12770 1279 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 BIKQ13323 160 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 SLC29A2Q14542 456 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 OR4D1Q15615 310 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 TRIP10Q15642 601 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 KNOP1Q1ED39 458 aaKnown RBP4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 ANKRD55Q3KP44 614 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZNF528Q3MIS6 628 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 MGAT5BQ3V5L5 792 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 XKR7Q5GH72 579 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 FGD3Q5JSP0 725 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 OR2G6Q5TZ20 316 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 DOK6Q6PKX4 331 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 DPY19L2P2Q6ZN68 376 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 GCNT7Q6ZNI0 430 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 MED25Q71SY5 747 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 PARS2Q7L3T8 475 aaKnown RBP4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 PIM3Q86V86 326 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 CALHM1Q8IU99 346 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZBTB8OSQ8IWT0 167 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 RHOT1Q8IXI2 618 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 UBQLNLQ8IYU4 475 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 MTURNQ8N3F0 131 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 GTPBP8Q8N3Z3 284 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 SLC44A3Q8N4M1 653 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 RNF148Q8N7C7 305 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 CLDN22Q8N7P3 220 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 PROKR2Q8NFJ6 384 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 PXT1Q8NFP0 134 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 OR56A3Q8NH54 315 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZNF420Q8TAQ5 688 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 ITFG1Q8TB96 612 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 BLOC1S5Q8TDH9 187 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 ADAMTS14Q8WXS8 1223 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 SORCS1Q8WY21 1168 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 SMARCD2Q92925 531 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 GCDHQ92947 438 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 FAM46BQ96A09 425 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 ULK4Q96C45 1275 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 PAGE5Q96GU1 130 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 THOC3Q96J01 351 aaKnown RBP4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 AKR1E2Q96JD6 320 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 MAGEB18Q96M61 343 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZNF778Q96MU6 729 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 BBC3Q96PG8 261 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 IL12RB2Q99665 862 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 PRMT1Q99873 361 aaKnown RBP4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 RTP3Q9BQQ7 232 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 TTYH2Q9BSA4 534 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 TMEM208Q9BTX3 173 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 ULBP1Q9BZM6 244 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 ATG10Q9H0Y0 220 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 ING2Q9H160 280 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 MS4A5Q9H3V2 200 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 CCDC134Q9H6E4 229 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 TMEM38AQ9H6F2 299 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 ANKRA2Q9H9E1 313 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 TPT1P8Q9HAU6 139 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 TMBIM4Q9HC24 238 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 LYRM4Q9HD34 91 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 IL23AQ9NPF7 189 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 GKN1Q9NS71 199 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 C1orf109Q9NX04 203 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 GSKIPQ9P0R6 139 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 PAK5Q9P286 719 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 COPZ2Q9P299 210 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 MRM2Q9UI43 246 aaKnown RBP4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 PURGQ9UJV8 347 aaKnown RBP4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 DKKL1Q9UK85 242 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 PADI3Q9ULW8 664 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 PRPF19Q9UMS4 504 aaKnown RBP4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 USP42Q9H9J4 1324 aaKnown RBP4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 TOPAZ1Q8N9V7 1692 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 TNRC18O15417 2968 aaPredicted RBP4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 NRAPQ86VF7 1730 aa4.38□□□□□ -1.71
HMGB3P9-201ENST00000441799 TRBV7-9A0A0J9YWB2 115 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 FAM237BA0A1B0GVD1 139 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 MEIOCA2RUB1 952 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 HEPACAM2A8MVW5 462 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 KRBOX1C9JBD0 128 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 I3L521 148 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 I6L893 689 aaPredicted RBP4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 GOSR2O14653 212 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 ADAM10O14672 748 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 NRP1O14786 923 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 SIGLEC5O15389 551 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 CHST10O43529 356 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 KIAA0513O60268 411 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 RAD1O60671 282 aa4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 RNASEH1O60930 286 aaKnown RBP4.37□□□□□ -1.71
HMGB3P9-201ENST00000441799 ZNF780AO75290 641 aaPredicted RBP4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms