RNA–Protein interactions for RNA: ENST00000394611.6

RTN4-206, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,161 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-206ENST00000394611 LMLNQ96KR4 655 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 TRIB3Q96RU7 358 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 CD180Q99467 661 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 KXD1Q9BQD3 176 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 AIFM2Q9BRQ8 373 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 ULBP3Q9BZM4 244 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 YIPF1Q9Y548 306 aa8.25□□□□□ -1.09
RTN4-206ENST00000394611 CHD7Q9P2D1 2997 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 OR52A4PA6NMU1 304 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 H7C1C5 153 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 TXNDC12O95881 172 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 IMPA1P29218 277 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 MPIP34949 423 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 WNT3P56703 355 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 MCCD1P59942 119 aaPredicted RBP8.24□□□□□ -1.09
RTN4-206ENST00000394611 LCN6P62502 163 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 ADAM8P78325 824 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 PUM1Q14671 1186 aaKnown RBP eCLIP8.24□□□□□ -1.093e-8■□□□□ 8.3
RTN4-206ENST00000394611 ST3GAL2Q16842 350 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 CCDC157Q569K6 752 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 EXOSC6Q5RKV6 272 aaKnown RBP8.24□□□□□ -1.09
RTN4-206ENST00000394611 C22orf39Q6P5X5 142 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 TMEM25Q86YD3 366 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 KIAA1958Q8N8K9 716 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 OR8D4Q8NGM9 314 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 OR13C2Q8NGS9 318 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 OR2T4Q8NH00 348 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 NANPQ8TBE9 248 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 SMPDL3BQ92485 455 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 PDLIM5Q96HC4 596 aaKnown RBP8.24□□□□□ -1.09
RTN4-206ENST00000394611 TM7SF3Q9NS93 570 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 B3GNT2Q9NY97 397 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 ACTR10Q9NZ32 417 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 CNOT2Q9NZN8 540 aaKnown RBP8.24□□□□□ -1.09
RTN4-206ENST00000394611 DPP7Q9UHL4 492 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 TRAV18A0A075B6X5 111 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 ZAR1LA6NP61 321 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 HOXA2O43364 376 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 SCGB1D2O95969 90 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 C1GALT1C1LP0DN25 315 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 ACVR2AP27037 513 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 ITPKBP27987 946 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 GNALP38405 381 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 PBX2P40425 430 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 FAM46CQ5VWP2 391 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 LYPLAL1Q5VWZ2 237 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 GDPD4Q6W3E5 623 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 CALHM3Q86XJ0 350 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 ADGRF3Q8IZF5 1079 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 RAB42Q8N4Z0 105 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 OR5M1Q8NGP8 315 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 FUBP3Q96I24 572 aaKnown RBP eCLIP8.24□□□□□ -1.092e-9■■■□□ 14.6
RTN4-206ENST00000394611 ZNF350Q9GZX5 532 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 CWH43Q9H720 699 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 NIPAL2Q9H841 368 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 LHX3Q9UBR4 397 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 NEU3Q9UQ49 428 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 EXOSC1Q9Y3B2 195 aaKnown RBP8.24□□□□□ -1.09
RTN4-206ENST00000394611 CHD9Q3L8U1 2897 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 A0A1W2PS29 197 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 OR10H2O60403 315 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 VNN2O95498 520 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 MSL3P1P0C860 447 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 AKR1C4P17516 323 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 UQCRC2P22695 453 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 SPINT3P49223 89 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 EVX1P49640 407 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 ZNF33BQ06732 778 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 ST3GAL3Q11203 375 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 USF2Q15853 346 aaPredicted RBP8.24□□□□□ -1.09
RTN4-206ENST00000394611 DEFB134Q4QY38 66 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 FAM220AQ7Z4H9 259 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 OAFQ86UD1 273 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 RDH10Q8IZV5 341 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 BEST3Q8N1M1 668 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 COX18Q8N8Q8 333 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 MS4A3Q96HJ5 214 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 P2RY12Q9H244 342 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 MTIF3Q9H2K0 278 aaKnown RBP8.24□□□□□ -1.09
RTN4-206ENST00000394611 HRH4Q9H3N8 390 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 KRCC1Q9NPI7 259 aaPredicted RBP8.24□□□□□ -1.09
RTN4-206ENST00000394611 NDUFB11Q9NX14 153 aa8.24□□□□□ -1.09
RTN4-206ENST00000394611 TRABD2BA6NFA1 517 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 E9PI62 339 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 FADS1O60427 444 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 SLC43A1O75387 559 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 PLGP00747 810 aaPredicted RBP8.23□□□□□ -1.09
RTN4-206ENST00000394611 F3P13726 295 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 DCTDP32321 178 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 XCR1P46094 333 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 LUMP51884 338 aaPredicted RBP8.23□□□□□ -1.09
RTN4-206ENST00000394611 TAP2Q03519 686 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 PDZD11Q5EBL8 140 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 LIPJQ5W064 366 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 TMEM65Q6PI78 240 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 PRSS42Q7Z5A4 293 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 NUDT13Q86X67 352 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 THAP6Q8TBB0 222 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 FCAMRQ8WWV6 532 aa8.23□□□□□ -1.09
RTN4-206ENST00000394611 SLC25A36Q96CQ1 311 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms