RNA–Protein interactions for RNA: ENST00000388948.7

LRRK1-201, Transcript of leucine rich repeat kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LRRK1, Length 7,671 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-201ENST00000388948 MARCH5Q9NX47 278 aa13.95□□□□□ -0.18
LRRK1-201ENST00000388948 OBP2AQ9NY56 170 aa13.95□□□□□ -0.18
LRRK1-201ENST00000388948 RHBDD3Q9Y3P4 386 aa13.95□□□□□ -0.18
LRRK1-201ENST00000388948 ASCC3Q8N3C0 2202 aaKnown RBP13.95□□□□□ -0.18
LRRK1-201ENST00000388948 KDM4EB2RXH2 506 aaPredicted RBP13.94□□□□□ -0.18
LRRK1-201ENST00000388948 ARHGEF15O94989 841 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 SPAG16Q8N0X2 631 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 CCDC74AQ96AQ1 378 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 CSNK1G1Q9HCP0 422 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 LHX3Q9UBR4 397 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 WASH4PA8MWX3 477 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 CENPBD1B2RD01 187 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 TRAPPC2LH3BP13 241 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 ZNF789Q5FWF6 425 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 ZNF554Q86TJ5 538 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 GPR150Q8NGU9 434 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 MYADMQ96S97 322 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 FOLH1BQ9HBA9 442 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 ITGB1BP2Q9UKP3 347 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 CARD8Q9Y2G2 431 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 HS3ST3A1Q9Y663 406 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 RAB38P57729 211 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 DEFB109BQ30KR1 87 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 ZNF404Q494X3 552 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 RNASE10Q5GAN6 216 aaKnown RBP13.94□□□□□ -0.18
LRRK1-201ENST00000388948 TPRA1Q86W33 373 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 HS3ST2Q9Y278 367 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 KIF13AQ9H1H9 1805 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 AHDC1Q5TGY3 1603 aaPredicted RBP13.94□□□□□ -0.18
LRRK1-201ENST00000388948 B4GAT1O43505 415 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 TNFSF15O95150 251 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 DPP4P27487 766 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 STEAP4Q687X5 459 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 ANKRD33Q7Z3H0 272 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 LILRB2Q8N423 598 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 H1FXQ92522 213 aaKnown RBP13.94□□□□□ -0.18
LRRK1-201ENST00000388948 GJB3O75712 270 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 BORAQ6PGQ7 559 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 HAGHLQ6PII5 290 aaPredicted RBP13.94□□□□□ -0.18
LRRK1-201ENST00000388948 METTL25Q8N6Q8 603 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 PTERQ96BW5 349 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 INTS14Q96SY0 518 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 ST6GALNAC5Q9BVH7 336 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 SLC16A7O60669 478 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 GABBR2O75899 941 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 HOXA9P31269 272 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 CLDN17P56750 224 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 SPHARQ15513 63 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 ZNF423Q2M1K9 1284 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 GPR157Q5UAW9 335 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 OR2S2Q9NQN1 319 aa13.94□□□□□ -0.18
LRRK1-201ENST00000388948 MKRN2OSH3BPM6 223 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 TSSK4Q6SA08 328 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 TMEM205Q6UW68 189 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 PRICKLE2Q7Z3G6 844 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 MFSD9Q8NBP5 474 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 ENPP4Q9Y6X5 453 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 RNASET2O00584 256 aaKnown RBP13.93□□□□□ -0.18
LRRK1-201ENST00000388948 IFNA7P01567 189 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 ZNF140P52738 457 aaPredicted RBP13.93□□□□□ -0.18
LRRK1-201ENST00000388948 TCEAL1Q15170 157 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 BPHLQ86WA6 291 aaPredicted RBP13.93□□□□□ -0.18
LRRK1-201ENST00000388948 C7orf34Q96L11 122 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 MUS81Q96NY9 551 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 HES7Q9BYE0 225 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 ARMC1Q9NVT9 282 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 MEGF11A6BM72 1044 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 TSPAN4O14817 238 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 SNAP29O95721 258 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 AOAHP28039 575 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 SHISA4Q96DD7 197 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 PIGQQ9BRB3 760 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 SLC6A16Q9GZN6 736 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 USP3Q9Y6I4 520 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 CHMP24386 653 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 SEC61A1P61619 476 aaKnown RBP13.93□□□□□ -0.18
LRRK1-201ENST00000388948 ARL6IP1Q15041 203 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 ZNF695Q8IW36 515 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 SIRT6Q8N6T7 355 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 VN1R3Q9BXE9 311 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 SOBPA7XYQ1 873 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 WNT11O96014 354 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 KNG1P01042 644 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 SERPINE2P07093 398 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 LCN1P31025 176 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 SGSHP51688 502 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 ZC3H10Q96K80 434 aaKnown RBP13.93□□□□□ -0.18
LRRK1-201ENST00000388948 ZNF317Q96PQ6 595 aaPredicted RBP13.93□□□□□ -0.18
LRRK1-201ENST00000388948 TRGV8A0A0C4DH27 118 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 CLCA1A8K7I4 914 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 ZNF264O43296 627 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 FBXO45P0C2W1 286 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 TRA2BP62995 288 aaKnown RBP13.93□□□□□ -0.18
LRRK1-201ENST00000388948 EXT1Q16394 746 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 TMEM151AQ8N4L1 468 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 OR5D14Q8NGL3 314 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 OR7D2Q96RA2 312 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 C6orf106Q9H6K1 298 aaPredicted RBP13.93□□□□□ -0.18
LRRK1-201ENST00000388948 IGSF5Q9NSI5 407 aa13.93□□□□□ -0.18
LRRK1-201ENST00000388948 TEX10Q9NXF1 929 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms