RNA–Protein interactions for RNA: ENST00000330133.4

MRPL54-201, Transcript of mitochondrial ribosomal protein L54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL54, Length 626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL54-201ENST00000330133 NUDT7P0C024 238 aa17.12■□□□□ 0.33
MRPL54-201ENST00000330133 UBTFL6P0CB48 400 aaPredicted RBP17.12■□□□□ 0.33
MRPL54-201ENST00000330133 IL7RP16871 459 aa17.12■□□□□ 0.33
MRPL54-201ENST00000330133 ZNF708P17019 499 aa17.12■□□□□ 0.33
MRPL54-201ENST00000330133 CLDN18P56856 261 aa17.12■□□□□ 0.33
MRPL54-201ENST00000330133 SKP2Q13309 424 aa17.12■□□□□ 0.33
MRPL54-201ENST00000330133 RIPPLY2Q5TAB7 128 aa17.12■□□□□ 0.33
MRPL54-201ENST00000330133 NSUN5P2Q63ZY6 315 aa17.12■□□□□ 0.33
MRPL54-201ENST00000330133 MAMDC2Q7Z304 686 aaPredicted RBP17.12■□□□□ 0.33
MRPL54-201ENST00000330133 SNX32Q86XE0 403 aa17.12■□□□□ 0.33
MRPL54-201ENST00000330133 LACC1Q8IV20 430 aa17.12■□□□□ 0.33
MRPL54-201ENST00000330133 CMIPQ8IY22 773 aa17.12■□□□□ 0.33
MRPL54-201ENST00000330133 UBQLNLQ8IYU4 475 aa17.12■□□□□ 0.33
MRPL54-201ENST00000330133 METTL25Q8N6Q8 603 aa17.12■□□□□ 0.33
MRPL54-201ENST00000330133 WDR60Q8WVS4 1066 aa17.12■□□□□ 0.33
MRPL54-201ENST00000330133 SMPDL3BQ92485 455 aa17.12■□□□□ 0.33
MRPL54-201ENST00000330133 ARSGQ96EG1 525 aa17.12■□□□□ 0.33
MRPL54-201ENST00000330133 RNF145Q96MT1 663 aa17.12■□□□□ 0.33
MRPL54-201ENST00000330133 ANKRD27Q96NW4 1050 aa17.12■□□□□ 0.33
MRPL54-201ENST00000330133 KLHDC3Q9BQ90 382 aa17.12■□□□□ 0.33
MRPL54-201ENST00000330133 TUBA1CQ9BQE3 449 aa17.12■□□□□ 0.33
MRPL54-201ENST00000330133 THUMPD3Q9BV44 507 aaKnown RBP17.12■□□□□ 0.33
MRPL54-201ENST00000330133 ZNF232Q9UNY5 417 aa17.12■□□□□ 0.33
MRPL54-201ENST00000330133 DNAJC13O75165 2243 aa17.11■□□□□ 0.33
MRPL54-201ENST00000330133 LOC100653049A0A140TA62 436 aa17.11■□□□□ 0.33
MRPL54-201ENST00000330133 CD8B2A6NJW9 211 aa17.11■□□□□ 0.33
MRPL54-201ENST00000330133 FBP2O00757 339 aa17.11■□□□□ 0.33
MRPL54-201ENST00000330133 KRT34O76011 436 aa17.11■□□□□ 0.33
MRPL54-201ENST00000330133 LINGO3P0C6S8 592 aa17.11■□□□□ 0.33
MRPL54-201ENST00000330133 GPX2P18283 190 aa17.11■□□□□ 0.33
MRPL54-201ENST00000330133 PGCP20142 388 aa17.11■□□□□ 0.33
MRPL54-201ENST00000330133 RPS4Y1P22090 263 aaKnown RBP17.11■□□□□ 0.33
MRPL54-201ENST00000330133 PGM1P36871 562 aa17.11■□□□□ 0.33
MRPL54-201ENST00000330133 ART3Q13508 389 aa17.11■□□□□ 0.33
MRPL54-201ENST00000330133 CYLC2Q14093 348 aaPredicted RBP17.11■□□□□ 0.33
MRPL54-201ENST00000330133 COQ5Q5HYK3 327 aa17.11■□□□□ 0.33
MRPL54-201ENST00000330133 PRAMEF8Q5VWM4 474 aa17.11■□□□□ 0.33
MRPL54-201ENST00000330133 PRAMEF7Q5VXH5 474 aa17.11■□□□□ 0.33
MRPL54-201ENST00000330133 OR52P1PQ8NH57 321 aa17.11■□□□□ 0.33
MRPL54-201ENST00000330133 BBS10Q8TAM1 723 aa17.11■□□□□ 0.33
MRPL54-201ENST00000330133 MAL2Q969L2 176 aa17.11■□□□□ 0.33
MRPL54-201ENST00000330133 TREX2Q9BQ50 279 aaPredicted RBP17.11■□□□□ 0.33
MRPL54-201ENST00000330133 ARMCX1Q9P291 453 aa17.11■□□□□ 0.33
MRPL54-201ENST00000330133 PLEKHB1Q9UF11 243 aaPredicted RBP17.11■□□□□ 0.33
MRPL54-201ENST00000330133 RNF6Q9Y252 685 aa17.11■□□□□ 0.33
MRPL54-201ENST00000330133 GPC6Q9Y625 555 aaPredicted RBP17.11■□□□□ 0.33
MRPL54-201ENST00000330133 MRASO14807 208 aa17.1■□□□□ 0.33
MRPL54-201ENST00000330133 SEC14L5O43304 696 aa17.1■□□□□ 0.33
MRPL54-201ENST00000330133 CLDN14O95500 239 aa17.1■□□□□ 0.33
MRPL54-201ENST00000330133 CLDN1O95832 211 aa17.1■□□□□ 0.33
MRPL54-201ENST00000330133 ARAFP10398 606 aa17.1■□□□□ 0.33
MRPL54-201ENST00000330133 ME2P23368 584 aa17.1■□□□□ 0.33
MRPL54-201ENST00000330133 ADH6P28332 368 aa17.1■□□□□ 0.33
MRPL54-201ENST00000330133 CHRNB4P30926 498 aa17.1■□□□□ 0.33
MRPL54-201ENST00000330133 SLC6A8P48029 635 aa17.1■□□□□ 0.33
MRPL54-201ENST00000330133 CDK6Q00534 326 aa17.1■□□□□ 0.33
MRPL54-201ENST00000330133 FOXF1Q12946 379 aa17.1■□□□□ 0.33
MRPL54-201ENST00000330133 LARS2Q15031 903 aaKnown RBP17.1■□□□□ 0.33
MRPL54-201ENST00000330133 QPRTQ15274 297 aa17.1■□□□□ 0.33
MRPL54-201ENST00000330133 TOMM34Q15785 309 aaPredicted RBP17.1■□□□□ 0.33
MRPL54-201ENST00000330133 TRMT5Q32P41 509 aaKnown RBP17.1■□□□□ 0.33
MRPL54-201ENST00000330133 LIN52Q52LA3 116 aa17.1■□□□□ 0.33
MRPL54-201ENST00000330133 RPS26P11Q5JNZ5 115 aaPredicted RBP17.1■□□□□ 0.33
MRPL54-201ENST00000330133 REP15Q6BDI9 236 aa17.1■□□□□ 0.33
MRPL54-201ENST00000330133 MYO7BQ6PIF6 2116 aa17.1■□□□□ 0.33
MRPL54-201ENST00000330133 MTDHQ86UE4 582 aaKnown RBP17.1■□□□□ 0.33
MRPL54-201ENST00000330133 CCDC71Q8IV32 467 aaPredicted RBP17.1■□□□□ 0.33
MRPL54-201ENST00000330133 PCYOX1LQ8NBM8 494 aa17.1■□□□□ 0.33
MRPL54-201ENST00000330133 FAM71CQ8NEG0 241 aa17.1■□□□□ 0.33
MRPL54-201ENST00000330133 FBXO27Q8NI29 283 aa17.1■□□□□ 0.33
MRPL54-201ENST00000330133 POC1BQ8TC44 478 aa17.1■□□□□ 0.33
MRPL54-201ENST00000330133 CA5BP1Q8WTZ4 195 aa17.1■□□□□ 0.33
MRPL54-201ENST00000330133 IKZF5Q9H5V7 419 aa17.1■□□□□ 0.33
MRPL54-201ENST00000330133 BCL2L10Q9HD36 194 aa17.1■□□□□ 0.33
MRPL54-201ENST00000330133 EXOSC3Q9NQT5 275 aaKnown RBP17.1■□□□□ 0.33
MRPL54-201ENST00000330133 GID8Q9NWU2 228 aa17.1■□□□□ 0.33
MRPL54-201ENST00000330133 IFT52Q9Y366 437 aa17.1■□□□□ 0.33
MRPL54-201ENST00000330133 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.09■□□□□ 0.33
MRPL54-201ENST00000330133 CLDN24A6NM45 220 aa17.09■□□□□ 0.33
MRPL54-201ENST00000330133 CLCA1A8K7I4 914 aa17.09■□□□□ 0.33
MRPL54-201ENST00000330133 HSPB2A8KAH6 182 aa17.09■□□□□ 0.33
MRPL54-201ENST00000330133 SNX3O60493 162 aa17.09■□□□□ 0.33
MRPL54-201ENST00000330133 NPPAP01160 153 aa17.09■□□□□ 0.33
MRPL54-201ENST00000330133 IL2RAP01589 272 aa17.09■□□□□ 0.33
MRPL54-201ENST00000330133 NID1P14543 1247 aa17.09■□□□□ 0.33
MRPL54-201ENST00000330133 SLC6A2P23975 617 aa17.09■□□□□ 0.33
MRPL54-201ENST00000330133 TIMP3P35625 211 aa17.09■□□□□ 0.33
MRPL54-201ENST00000330133 RPS3AP61247 264 aaKnown RBP17.09■□□□□ 0.33
MRPL54-201ENST00000330133 RAC1P63000 192 aa17.09■□□□□ 0.33
MRPL54-201ENST00000330133 CAPRIN1Q14444 709 aaKnown RBP17.09■□□□□ 0.33
MRPL54-201ENST00000330133 HSPB2Q16082 182 aa17.09■□□□□ 0.33
MRPL54-201ENST00000330133 ZSWIM7Q19AV6 140 aa17.09■□□□□ 0.33
MRPL54-201ENST00000330133 REEP3Q6NUK4 255 aa17.09■□□□□ 0.33
MRPL54-201ENST00000330133 NFKBIDQ8NI38 313 aa17.09■□□□□ 0.33
MRPL54-201ENST00000330133 TMEM234Q8WY98 164 aa17.09■□□□□ 0.33
MRPL54-201ENST00000330133 ST8SIA1Q92185 356 aa17.09■□□□□ 0.33
MRPL54-201ENST00000330133 CNOT9Q92600 299 aaKnown RBP17.09■□□□□ 0.33
MRPL54-201ENST00000330133 MRGPRX4Q96LA9 322 aa17.09■□□□□ 0.33
MRPL54-201ENST00000330133 NPAS1Q99742 590 aa17.09■□□□□ 0.33
MRPL54-201ENST00000330133 SH3GL1Q99961 368 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms