RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 TMEM239Q8WW34 195 aa16.67■□□□□ 0.26
VIM-201ENST00000224237 OMA1Q96E52 524 aa16.67■□□□□ 0.26
VIM-201ENST00000224237 CNIH4Q9P003 139 aa16.67■□□□□ 0.26
VIM-201ENST00000224237 A0A1B0GWA3 101 aa16.67■□□□□ 0.26
VIM-201ENST00000224237 XPNPEP2O43895 674 aa16.67■□□□□ 0.26
VIM-201ENST00000224237 LRP3O75074 770 aa16.67■□□□□ 0.26
VIM-201ENST00000224237 ICOSLGO75144 302 aa16.67■□□□□ 0.26
VIM-201ENST00000224237 NTN1O95631 604 aa16.67■□□□□ 0.26
VIM-201ENST00000224237 UBL4AP11441 157 aa16.67■□□□□ 0.26
VIM-201ENST00000224237 ALDH3B2P48448 385 aa16.67■□□□□ 0.26
VIM-201ENST00000224237 WDR88Q6ZMY6 472 aa16.67■□□□□ 0.26
VIM-201ENST00000224237 RASSF6Q6ZTQ3 369 aa16.67■□□□□ 0.26
VIM-201ENST00000224237 LSRQ86X29 649 aaPredicted RBP16.67■□□□□ 0.26
VIM-201ENST00000224237 GALNT6Q8NCL4 622 aa16.67■□□□□ 0.26
VIM-201ENST00000224237 OR8K3Q8NH51 312 aa16.67■□□□□ 0.26
VIM-201ENST00000224237 GRHL3Q8TE85 626 aa16.67■□□□□ 0.26
VIM-201ENST00000224237 MPP4Q96JB8 637 aa16.67■□□□□ 0.26
VIM-201ENST00000224237 HS6ST2Q96MM7 605 aa16.67■□□□□ 0.26
VIM-201ENST00000224237 EXOSC3Q9NQT5 275 aaKnown RBP16.67■□□□□ 0.26
VIM-201ENST00000224237 AASSQ9UDR5 926 aa16.67■□□□□ 0.26
VIM-201ENST00000224237 NGFRP08138 427 aa16.66■□□□□ 0.26
VIM-201ENST00000224237 JMJD7P0C870 316 aa16.66■□□□□ 0.26
VIM-201ENST00000224237 GABRB1P18505 474 aa16.66■□□□□ 0.26
VIM-201ENST00000224237 PEX19P40855 299 aa16.66■□□□□ 0.26
VIM-201ENST00000224237 SLC26A5P58743 744 aa16.66■□□□□ 0.26
VIM-201ENST00000224237 CD226Q15762 336 aa16.66■□□□□ 0.26
VIM-201ENST00000224237 ALG10BQ5I7T1 473 aa16.66■□□□□ 0.26
VIM-201ENST00000224237 GALNT15Q8N3T1 639 aa16.66■□□□□ 0.26
VIM-201ENST00000224237 PHOSPHO1Q8TCT1 267 aa16.66■□□□□ 0.26
VIM-201ENST00000224237 C8orf44Q96CB5 159 aa16.66■□□□□ 0.26
VIM-201ENST00000224237 DDA1Q9BW61 102 aa16.66■□□□□ 0.26
VIM-201ENST00000224237 ZNF226Q9NYT6 803 aa16.66■□□□□ 0.26
VIM-201ENST00000224237 RPS6KB2Q9UBS0 482 aa16.66■□□□□ 0.26
VIM-201ENST00000224237 PCNX2A6NKB5 2137 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 LOC102723996A0A087X1L8 192 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 TRBV11-1A0A0K0K1C0 115 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 A0A1W2PQD3 144 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 KLF4O43474 513 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 PIP5K1CO60331 668 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 STK17BO94768 372 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 OR6B1O95007 311 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 IGFBP1P08833 259 aaPredicted RBP16.65■□□□□ 0.26
VIM-201ENST00000224237 CD63P08962 238 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 STAT5AP42229 794 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 COPZ1P61923 177 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 NDUFAF6Q330K2 333 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 C12orf73Q69YU5 71 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 ULK3Q6PHR2 472 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 DHRS13Q6UX07 377 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 CASP12Q6UXS9 341 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 CCDC103Q8IW40 242 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 OR5L2Q8NGL0 311 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 WDR36Q8NI36 951 aaKnown RBP16.65■□□□□ 0.26
VIM-201ENST00000224237 TEX47Q8TBZ9 253 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 ZFAND2BQ8WV99 257 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 ARSGQ96EG1 525 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 TAAR9Q96RI9 348 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 VCX3AQ9NNX9 186 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 SELENONQ9NZV5 590 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 PTRH2Q9Y3E5 179 aaKnown RBP16.65■□□□□ 0.26
VIM-201ENST00000224237 OR6C70A6NIJ9 312 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 PTGES3LE9PB15 166 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 ZNF264O43296 627 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 FAM20BO75063 409 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 CSO75390 466 aaKnown RBP16.65■□□□□ 0.26
VIM-201ENST00000224237 KLF7O75840 302 aaPredicted RBP16.65■□□□□ 0.26
VIM-201ENST00000224237 RBM34P42696 430 aaKnown RBP16.65■□□□□ 0.26
VIM-201ENST00000224237 GPR4P46093 362 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 SLC35A2P78381 396 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 SKP2Q13309 424 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 EIF3IQ13347 325 aaKnown RBP16.65■□□□□ 0.26
VIM-201ENST00000224237 SMN1Q16637 294 aaKnown RBP16.65■□□□□ 0.26
VIM-201ENST00000224237 APOOLQ6UXV4 268 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 PTCHD4Q6ZW05 846 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 KCTD8Q6ZWB6 473 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 KIF18BQ86Y91 864 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 CADM2Q8N3J6 435 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 GATSQ8NAP1 163 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 POGLUT1Q8NBL1 392 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 ZNF540Q8NDQ6 660 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 OR2Y1Q8NGV0 311 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 DNAJA4Q8WW22 397 aaPredicted RBP16.65■□□□□ 0.26
VIM-201ENST00000224237 TRUB1Q8WWH5 349 aaKnown RBP16.65■□□□□ 0.26
VIM-201ENST00000224237 DEPDC7Q96QD5 511 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 DUSP21Q9H596 190 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 CCNB1IP1Q9NPC3 277 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 PAK1IP1Q9NWT1 392 aaPredicted RBP16.65■□□□□ 0.26
VIM-201ENST00000224237 PISDQ9UG56 409 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 TMEM5Q9Y2B1 443 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 MED31Q9Y3C7 131 aa16.65■□□□□ 0.26
VIM-201ENST00000224237 A0A1W2PNU3 283 aaPredicted RBP16.64■□□□□ 0.25
VIM-201ENST00000224237 ALG1L2C9J202 215 aa16.64■□□□□ 0.25
VIM-201ENST00000224237 GTPBP1O00178 669 aaKnown RBP16.64■□□□□ 0.25
VIM-201ENST00000224237 UMODP07911 640 aa16.64■□□□□ 0.25
VIM-201ENST00000224237 ENDOUP21128 410 aaKnown RBP16.64■□□□□ 0.25
VIM-201ENST00000224237 SMSP52788 366 aa16.64■□□□□ 0.25
VIM-201ENST00000224237 PRKCDQ05655 676 aa16.64■□□□□ 0.25
VIM-201ENST00000224237 MEX3DQ86XN8 651 aaKnown RBP16.64■□□□□ 0.25
VIM-201ENST00000224237 ALDH16A1Q8IZ83 802 aa16.64■□□□□ 0.25
VIM-201ENST00000224237 IPCEF1Q8WWN9 437 aaPredicted RBP16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms